Populus trichocarpa (black cottonwood): 7463012
Help
Entry
7463012 CDS
T01077
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00270
Cysteine and methionine metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
7463012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7463012
03032 DNA replication proteins [BR:
pop03032
]
7463012
03036 Chromosome and associated proteins [BR:
pop03036
]
7463012
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pop02048
]
7463012
Enzymes [BR:
pop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
7463012
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
7463012
DNA replication proteins [BR:
pop03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
7463012
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
7463012
Prokaryotic defense system [BR:
pop02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
7463012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
Motif
Other DBs
NCBI-GeneID:
7463012
NCBI-ProteinID:
XP_052307868
LinkDB
All DBs
Position
4:15546767..15554751
Genome browser
AA seq
1571 aa
AA seq
DB search
MGSSSILDITTNDPVDNSTFSASSGMRKNKKGKQKSSVSNAKKEVPEKTAKGKKRNFSDT
NKEDPAGGSLTRPRRAAACKDFKEKSLRLHEEKSSVVESKKEQVVNEEILALRLTQGQEE
GRPNRRLIDFVVHDANGNPQPLEMIEVDDMFISGVIMPLEESLDKEKEVPVRCEGFGRIE
AWNISGYEDGSPVIWLTTEVADYDCIKPSGGYKKFFDRFFQKALACIEVYKKLSRFSGGN
PEFTLDELLAGVVRAMSGNKCFSGAPSVKNFLVSQGEFIYQQITGLDQTSKKNDKFFSDL
PALVALRDESRNHGSVLLAKAANPGGNLVIDPKSVDGAIVNQSNQSSTIAEEDEDAKLAR
LLQEEEYWHSNMRQKKSRGSASASNTIYIKINEDEIANDYPLPVFYKHSDEETDEYVVVA
SDDVIDHPDDLPRKMLHNWSLYNSDSRLISLELLPMKPCEDIDVTIFGSGRMTEDDGSGF
CLDDDPDQSSSRGSEAQDDMGLPIFLSAIKEWMIEFGSSMIFISIRTDMAWYRLGKPSKQ
YGSWYKPVLKTVKLARSIITLLKEQSRVSRLSFADVIRKVSEFKKDHHAYISSDPAAIER
YVVVHGQIILQLFAEFPDQKIKKCAFVVGLTRKMEERHHTKWVVNKKAIVQKFQSNLNPR
AAMDTVAPGSKRKLMQATTTRLINRIWGEYYSNYSPEDLEEGAECEVKEEDEAEEQYENE
DDDKEEVVEKTLKPRSVSERTKSHTSQKEVRWDGNPVSKTSSGEAIYKRAIVCGEVIVVG
DAVLVEVDESDELPAIYFVEYMFETRNGSRMFHGRMMKRGSETVLGNTANDREVFLTTEC
MNYKLQDAKQAIILEVLKRPWGHDHRKDNINADRIDREKAEERKKKGLQVEYYCKSLYWP
ERGAFFTLPLDTMGLGSGVCHSCNLKIAEEDKDIFRVNSSQTGFSYKGTEYSVHDFVYVS
PHQFASERGENETFKGGRNVGLKPYVVCQLLEVVLKEPKQAETRSTQVNVQRFFRPDDIS
PEKAYCSDIREIYYSEETHLLSVETIEGKCEVRKKNDIPTCSAPAIFDNIFFCEHMYDPS
KGSLKQLPAQVKSKFSAVSRDGDVASRKRKGKSKEGENDIEADKQREASPENRLATLDIF
AGCGGLSEGLQQAGVSSTKWAIEYEEPAGEAFKLNHAGSLMFINNCNVILRAVMEKCGDA
DDCISTSEAGELASSLDAKVIDGLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEM
ILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLTIASLLQMGYQVRFGILEAGAYGVS
QSRKRAFIWAASPEEILPEWPEPMHVFAAPELKITLSEKSQYSAVRSTAYGAPFRAITVR
DTIGDLPDVGNGASKTNLEYGNDPVSWFQKKIRGDMVVLTDHISKEMNELNLIRCKKIPK
RPGADWRDLPDEKVKLSTGQMVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQ
PMGKVGMCFHPEQDRILTVRECARSQGFPDSYQFSGNIHHKHRQIGNAVPPPLSYALGRK
LKEALDSKRRK
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttcatctatattggatataacaacaaatgacccagttgataattctactttt
tccgcatcatcaggaatgaggaagaacaagaaaggaaaacaaaaatcttcagtttccaat
gcaaagaaggaagtgccagaaaaaaccgcaaaaggaaagaagagaaacttctctgatact
aacaaggaagatcctgctggtgggtcgttgacaaggcctaggagagctgctgcatgcaaa
gacttcaaggagaaatctctacgtttgcatgaagagaagtcttctgttgttgaatcaaag
aaagaacaagttgtcaacgaagagattttagctcttcgtttgactcaaggacaagaagag
ggtcgccccaacaggagattgattgattttgttgtgcatgatgcaaatggtaaccctcaa
cccttggagatgattgaagttgatgatatgtttatctctggtgttataatgcctcttgag
gagagccttgataaggaaaaagaagtgcctgttaggtgtgaaggctttgggaggatagaa
gcatggaatatctctggttacgaagatggatccccagtcatttggctgactactgaagta
gcagattatgattgcatcaagccttccggtggctacaagaagttctttgatcgtttcttt
cagaaggcactcgcttgcatagaagtttacaaaaaactctcaagattttctggaggaaac
cctgaattcacccttgatgagttgcttgctggcgttgtgcgagcaatgagcggaaataag
tgtttctctggtgctccttccgtaaagaatttcctcgtttctcagggtgaatttatttat
caacaaataactggtttagaccagacctccaaaaagaacgataaatttttttcagacttg
cctgctcttgttgccttgagagatgaaagtcgcaatcatggaagtgttctgctagcaaaa
gcagcaaatcctggtggcaacttggtgattgatccaaagtctgtggatggtgctattgtg
aatcagtctaaccagtccagcaccatagctgaggaagatgaagatgcaaagttagcaaga
ttattacaggaagaagagtattggcactctaatatgaggcaaaagaaaagtcggggttca
gcttctgcatcgaacacaatctacatcaaaattaatgaagatgagattgcaaatgattac
cctctccctgtgttttacaaacactctgatgaagaaaccgatgagtatgtagttgttgca
agtgatgatgtaattgaccaccctgatgatctcccaagaaaaatgcttcataactggtca
ctttataactcagactcaaggttgatttctttggagcttcttccaatgaaaccttgtgaa
gatattgatgtcaccatctttggatcaggacgcatgactgaagatgatggaagcgggttc
tgtcttgatgatgatcctgatcagtcttcttctaggggttcggaggctcaggatgacatg
ggtttgccaatatttttgagtgcgataaaggagtggatgattgagtttggatcatcaatg
atttttatatcaatacgcacagacatggcctggtatagacttgggaagccatcaaaacaa
tatggttcctggtacaagccagtcctaaaaacggtaaagcttgcaagaagcatcattaca
ttgttgaaggagcaaagtcgagtatcacggctttctttcgcagatgtaatccggaaagtg
tctgagttcaagaaggatcatcatgcttatatttcatctgatccagcagctattgagagg
tacgtagttgttcatggacagataatactgcaactttttgccgagtttccagatcagaag
atcaagaaatgtgcttttgtggtcggtttgactcgtaaaatggaggagaggcaccatact
aaatgggtagtgaacaaaaaagccattgtgcaaaagtttcaatccaatttgaatcctcga
gcagcaatggatactgtggctcctggatccaagaggaagctcatgcaggcaacaaccaca
aggctgatcaacagaatttggggggagtactattcgaactattctccagaggatttggaa
gagggagctgaatgtgaagtgaaagaagaggatgaagctgaggagcagtatgaaaatgaa
gatgatgataaagaggaggtggtagagaaaacactaaaacctcgttcagtgtctgaacgc
actaaatcacatacttcacaaaaagaagtaagatgggatgggaatcctgtaagcaaaaca
tcttctggagaagccatttacaagcgagccattgtttgtggagaggtcattgtggtgggg
gatgctgtcttagtggaggttgatgaatcggatgaacttcctgccatctattttgtggag
tacatgtttgaaacacggaatggaagcagaatgtttcatgggagaatgatgaagcgagga
tctgagacagttcttggtaacactgccaatgatagagaggttttcttaacaaccgagtgc
atgaattataagttacaggatgctaagcaagcaattattctggaagttctaaaaagacct
tggggacatgatcacaggaaagataacatcaatgctgatagaattgatagggaaaaggca
gaagagaggaaaaagaaaggattgcaagtagaatattactgtaaaagcttgtactggccg
gaaaggggtgctttctttactctcccgcttgatactatgggtcttgggtctggtgtctgc
cactcttgtaacttaaaaatagctgaagaagacaaggatattttcagagtaaattcttct
cagacaggattttcatacaagggaactgagtactctgtccacgattttgtctacgtaagc
cctcatcaatttgcttcagaaaggggggagaacgaaacttttaagggtggaaggaatgtt
gggttgaagccttatgttgtgtgccagttgttggaggttgttctaaaggaaccaaaacaa
gccgaaacaagatccacccaggtcaatgttcaaagatttttcagaccagatgatatttca
cctgagaaggcatattgttctgatattagggagatatattacagtgaagaaacacatctt
ttatcagtcgagacaattgaagggaaatgtgaagtcagaaagaaaaatgacattccaaca
tgcagtgctcctgcaatctttgataatatcttcttctgcgagcacatgtatgatccttct
aaagggtccctcaagcagctaccagctcaagtcaaatcgaagttttctgcagtgagtaga
gatggtgatgttgcaagtagaaagagaaagggaaagtctaaagaaggagaaaatgatata
gaagctgacaaacaaagggaagcatctccagagaaccgtttggccacgttggatatattt
gccggttgtggtggattgtctgaaggattgcagcaagctggtgtctcatcaaccaagtgg
gctattgaatatgaagagcctgctggggaagcatttaaactcaaccatgcagggtcattg
atgttcattaataattgtaatgtgatcctgagggctgtcatggagaaatgtggagatgca
gatgactgtatttctacttctgaggctggtgaattggcttcatcacttgatgcaaaggtg
attgatggtttgccattgccagggcaggtggatttcatcaatggagggcctccatgccag
ggcttctctggaatgaataggtttaatcagagcacttggagtaaagttcaatgtgagatg
atcttagcattcttatccttcgctgattatttccgcccaaagtatttcctcttagagaat
gtgaggaacttcgtatctttcaataaaggacagactttccgtttaactatcgcttctctt
cttcagatgggttatcaggtgaggtttggtattttggaagctggagcatatggagtatcc
cagtcacgtaaacgggcctttatatgggcagcctcccccgaagagatactcccagaatgg
ccagagccaatgcatgtttttgctgccccagagttaaaaatcacattgtctgagaaatca
caatattctgctgttagaagtactgcttatggagcccctttccgtgcaataacagtcaga
gatacaattggtgatctccctgatgtagggaatggtgcttcgaagactaatttggagtac
ggaaatgatcctgtctcttggtttcaaaagaagattcgaggcgacatggttgtcttgact
gaccatatatcaaaagaaatgaatgagctgaatcttatcagatgcaagaagatcccaaag
cggccaggtgctgactggcgtgatcttccagatgaaaaggtcaaattgtctactggacaa
atggttgatttgataccatggtgcttgccaaacacagctaaacgacacaatcagtggaag
gggctgtttggaaggttggattgggaagggaacttcccaacatcaataacagatcctcag
ccaatgggtaaggtggggatgtgctttcaccctgaacaggacaggattcttactgttcgt
gaatgtgcacgatctcaaggattcccagatagctatcagttttctggtaacattcatcac
aagcatcggcaaatcggaaatgctgtccctcctcctttatcatatgcactgggaaggaaa
cttaaggaagcactggatagtaagaggcggaaatag
DBGET
integrated database retrieval system
