Populus trichocarpa (black cottonwood): 7463134
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Entry
7463134 CDS
T01077
Name
(RefSeq) truncated transcription factor CAULIFLOWER D
KO
K09264
MADS-box transcription factor, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7463134
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
7463134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
Ig_CYK3_C
YabA
KH_PNO1_2nd
Tho2
Leu_zip
DUF1192
DUF2046
Motif
Other DBs
NCBI-GeneID:
7463134
NCBI-ProteinID:
XP_002321711
UniProt:
A9PA19
LinkDB
All DBs
Position
15:11873576..11879468
Genome browser
AA seq
203 aa
AA seq
DB search
MGRGKVELKRIENSASRQVTFSKRRNGLLKKAFELSILCEAEVSLIIFSPSGKFYQFSSH
DMERSVARYRSEVGLPGTNDQRSRSLEFWRCEIEELRRTITKTEAQLRHFIGEDIAPLGL
KELKQLERQLKTGVERIRSKKKRVISEHIKLLKSEQRALQEENARLQKRLHELPDANVSS
RIPEPNACNAFHQQRIFLEGSHQ
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggggagagggaaagtggagctaaaaagaatagagaattcagctagcaggcaagtaacc
ttctcaaagagaagaaatgggcttctaaagaaagctttcgagctttcaattctctgcgaa
gctgaagtttccctcattattttctctccaagcggaaagttttaccagttttcaagtcat
gacatggagaggagcgttgctcggtaccggagtgaagtcggtctgcctggaacaaatgac
caacgctctagatccttggagttttggagatgtgagattgaagagttaaggagaacaata
actaaaacagaagcacagcttaggcactttattggagaagatatagcaccgctggggttg
aaagagttgaagcaactggagcgacagttaaagacaggggttgagcgtatccgctctaag
aagaaacgagtcatctcagagcacatcaaattgttgaagagcgagcaaagagcccttcaa
gaggagaatgctcgtcttcagaaaagattgcatgagctgcccgatgccaatgtaagctcg
aggattccggaaccaaatgcatgtaatgcttttcatcagcaaaggatttttcttgaggga
tctcaccaataa
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