Populus trichocarpa (black cottonwood): 7463177
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Entry
7463177 CDS
T01077
Name
(RefSeq) oxysterol-binding protein-related protein 1C
KO
K20456
oxysterol-binding protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7463177
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
7463177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Oxysterol_BP
PH_11
PH
PH_8
PH_13
Motif
Other DBs
NCBI-GeneID:
7463177
NCBI-ProteinID:
XP_024451188
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All DBs
Position
2:6324570..6333980
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AA seq
809 aa
AA seq
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MHPLCCISTVSDHSPANLSMAVTARSDPGSTTVHPQIQIQIQNHNQHNTNHFSNHHHHNH
STASNCSSSNGTDGNKSNRTSHQREQPLVQVDVKINDIVGNGISGVLYKWVNYGKGWRPR
WFVLQDGVLSYYKIHGPDKIFVNQETEKGSKVIGEESMRRISRPKNGNSQNRRKPVGEIH
LKVSSIRESRSDDKRFSIFTGTKRLHLRAETREDRLAWMEALQAVKDMFPRMSNSELMAP
LDNVAVSTEKLRQRLQEEGVREEVIQDGEQIMRTEFAALQNQIVLLKQKQWLLIDTLRQL
ETEKVDLENTVVDESQRQLNDQRTSSSTLPQDKFSASVSESDDDNERVDAAEEETDDEEN
TFFDTRDFLSSGSFKSNESGFRTSSFSSDDEGFFSLESEDCIDPSIRSVGSNYPYIKRRK
KLPDPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEDLEYSYLLDRAYE
WGKQGNSLMRILNVAAFAVSGYASTEGRVCKPFNPLLGETYEADYPDKGLRFFSEKVSHH
PMIVACHCVGTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDDGEVFQWSKVTTSIYNL
ILGKLYCDHYGTMRLEGNCGYSCKLKFKEQSIIDRNPHQVQGVVQDRHGKTVATLFGKWD
ESVYYMNGDFSGKGKGFESTKEAHMLWKRSKPPRFPTRYNLTRFAITLNELTPGLEEKLP
PTDSRLRPDQRYLENGEFDMANSEKLRLEQRQRQARKMQERGWQPRWFAKDKGSDAYHYV
GGYWEARDKGDWDSCPDIFGQIPIDQLFD
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgcatccgctttgctgcatctccaccgtgtccgatcactcgccggcgaatctatcgatg
gcagtcaccgccagatccgaccccggatcaaccaccgttcatccacaaattcaaattcaa
atccaaaaccacaaccaacacaacactaatcatttctcaaaccaccaccaccacaaccac
agcaccgccagcaactgcagcagcagcaacggaacagatggtaacaaaagtaacaggacg
agtcaccagagggagcaaccacttgtacaggtggatgtgaagataaatgatatagtaggg
aatgggatatcgggggttttatataagtgggtgaactacgggaaaggttggaggccgaga
tggttcgttttgcaagatggagtgttgtcgtattataaaattcatggacctgataagatt
ttcgttaatcaagagaccgagaaaggatccaaagttatcggtgaagaatctatgagacgt
atttctaggcctaagaatgggaattcgcagaataggcgtaagcctgttggtgaaattcac
ctcaaggtatcatcaatccgcgagagcagatcagatgacaagaggttctcaatatttact
ggcacaaagaggctgcacttgagagcagagacacgtgaggatcgcttggcatggatggaa
gcattgcaggctgtgaaggatatgttccctcgtatgtctaacagtgaactaatggctcct
ttggacaatgtggctgtctcaacagagaagctgaggcagcggcttcaagaggagggagtc
agggaggaggtgatacaggatggcgagcagatcatgaggactgagtttgcagcgctgcag
aaccagatagtgcttctcaagcagaagcaatggcttctcatcgacacgcttcgccagcta
gagacagaaaaggttgacttggagaatacagtagttgatgagagccaaagacagttgaac
gatcaacgcacatcttcttccactctgccacaagacaaatttagtgcaagtgtcagtgaa
tctgatgatgataatgaaagagttgatgctgcagaggaagagacggatgatgaagagaat
acattctttgacacccgtgattttctatcatcgggttcttttaaaagtaacgagtctggt
ttccgaacatcatcattctcttcggatgatgaagggtttttttctctagaatcagaagat
tgcattgatccttcaattagatctgttggctcaaactatccttacattaagcgtcgtaag
aagttacctgacccaattgaaaaagaaaaaggtgtcagtctatggtcgatgattaaggat
aacattgggaaggaccttaccaaagtttgccttcctgtttacttcaatgagcctctctct
tcgttacaaaaatgctttgaagatttggaatactcgtatcttcttgatcgggcatatgaa
tggggaaaacagggtaacagtcttatgaggattcttaatgtggctgcttttgctgtttct
ggatatgcttcaactgaaggaagagtttgcaaaccttttaatccattattaggggaaaca
tatgaggccgactatccagataagggcctccggtttttctcagaaaaggtcagtcatcac
cccatgattgtcgcatgccattgtgtgggtacaggatggaaattttggggtgatagcaat
ctaaaaagcaaattttggggtcgctcgattcagcttgatcccgttggagttttgaccttg
gaatttgatgacggagaagtcttccaatggagtaaggttacaacatcaatatacaatctt
atactaggaaaattgtactgtgatcactatggtacaatgcgattagaaggaaattgtggg
tattcatgtaagctgaaattcaaggagcagtctattatagaccgaaatcctcaccaggta
cagggagtagttcaagataggcatggtaaaacagtggcaactctttttggaaaatgggat
gagagcgtgtattacatgaatggtgacttttccgggaagggaaaaggatttgagtctacg
aaagaagctcatatgctctggaagcgaagtaaacctcccagatttcccaccagatacaat
ttgacacgctttgccattacattgaatgagctcactcctggacttgaggaaaagttgcct
cccacagattcaaggcttagacccgatcaaaggtacttggaaaatggtgaatttgatatg
gcaaattcagagaaattacggctagagcaacgtcagcgccaggcccgaaagatgcaagag
cggggttggcagccgcggtggtttgcaaaggataaaggaagtgatgcataccattatgtt
ggcgggtattgggaggcaagagacaagggagattgggattcgtgccctgatatatttggc
cagattcctatcgatcagctctttgattaa
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