Populus trichocarpa (black cottonwood): 7463311
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Entry
7463311 CDS
T01077
Name
(RefSeq) ABC transporter F family member 1 isoform X1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7463311
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
7463311
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GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
AAA_28
MMR_HSR1
RsgA_GTPase
AAA_22
AAA_24
AAA_15
Motif
Other DBs
NCBI-GeneID:
7463311
NCBI-ProteinID:
XP_002314297
UniProt:
B9HQM5
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Position
9:1555229..1560042
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AA seq
599 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAAATSSKAAAAADSQNGGVDKLSNGVGALQISDRTC
TGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLAAIGC
RELPIPEHMDIYHLTREIEASDMSSLEAVISCDEERLELEKEAEALAAQDDGGGEALDRV
YERLEAMDVATAEKRAAEILFGLGFNKQMQTKKTRDFSGGWRMRIALARALFMNPTVLLL
DEPTNHLDLEACVWLEETLKNFERILVVVSHSQDFLNGVCTNIIHMQSKKLKIYTGNYDQ
YVQTRSELEENQMKQYKWEQDQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLT
ERVARDQVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNG
AGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDLELSALLFMIREYPGNEEE
KMRAAIGKFGLTGKAQVMPMSNLSDGQRSRVIFAWLAFRQPQMLLLDEPTNHLDIETIDS
LAEALKEWDGGLVLVSHDFRLINQVAQEIWVCENQAVTRWEGDIMEFKAHLKKKAGLSD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggtttccgacgccagcaagaagaaggccgctcaaaagaaggcggcggccgctgccaag
agaggtggaaaagcagctgcaacctcctcaaaagcagcggcggctgccgattcgcagaat
ggaggtgttgataagttgtcgaatggagttggagctcttcagatttccgatcggacttgt
actggcgtcctatgctcgcatcctctttctagagatatccgcattgaatcattgtcagtt
acttttcatggacatgatctcattgttgattctgagctggagctaaactatggcagacga
tatggattacttggtttaaatggatgtgggaaatcaacactcctagctgcaatagggtgt
cgagagcttccaattccagagcacatggacatatatcacctcaccagggagatcgaagct
tctgacatgtcttcacttgaggctgtgataagctgtgatgaggagaggttggagttggag
aaagaagcagaggccttggctgcacaggatgatggaggtggagaagctcttgatcgtgtt
tatgagcgtttggaggccatggatgtggcaactgcagagaaacgtgctgctgaaattttg
tttggtcttggatttaacaagcaaatgcaaacaaagaaaactcgagatttttctggtggc
tggagaatgaggattgcattagctcgggctttgttcatgaacccaactgtcctcttactt
gatgagccaaccaatcatcttgacctcgaagcctgtgtctggttggaggaaactttaaag
aactttgaacgcattctagttgtggtttctcactctcaggatttcttgaatggagtctgc
acaaacattatccacatgcaaagcaagaaattgaaaatctacactggtaactatgatcag
tatgttcagactcgttctgaactggaagaaaaccagatgaaacagtacaaatgggagcag
gatcagatttcttccatgaaggagtatattgcccgatttgggcatgggtcagcaaagtta
gctcgtcaggcgcagagcaaggagaaaactcttgctaagatggaacgcggtggacttaca
gaaagggttgcgagagaccaggttctggtctttcgctttgttgatgtggggaagctccca
ccacccgtgcttcagtttgttgaagtaacctttggctacacacctgataacctcatttat
aagaatcttgactttggtgtggatctggactctagggttgcgctggttggccccaacgga
gctggaaagagtaccttgctgaagcttatgacgggtgacttggttcctttagatggcatg
gttcgccggcacaatcacttgaggattgcgcaatttcatcaacacttgactgagaaacta
gacttagaattgtctgctctcctttttatgattagagagtatccagggaatgaggaagaa
aaaatgagggcagcgattgggaagtttgggttgacaggcaaggcccaggtgatgcccatg
agtaatttgtcagatgggcagaggagcagggtgatttttgcttggctggcatttaggcaa
ccccaaatgctccttctggatgagccaaccaaccatttggatattgagaccatcgactcc
ctggcagaggcattgaaagagtgggatgggggtctggttcttgttagccatgatttcagg
ctcataaaccaggtagcgcaggagatatgggtatgtgagaatcaagctgttacccgttgg
gagggcgacattatggaattcaaggcgcacctcaagaagaaggcagggttgtcggattga
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