KEGG   Populus trichocarpa (black cottonwood): 7463430
Entry
7463430           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7463430
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    7463430
Enzymes [BR:pop01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     7463430
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    7463430
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-rbx1 zf-Nse Prok-RING_4 zf-ANAPC11 Rtf2 zf-RING_10 Zn_ribbon_6 zf-RING_4 zf-RING_6 TRAF3_RING
Other DBs
NCBI-GeneID: 7463430
NCBI-ProteinID: XP_002321288
UniProt: B9IBA6
LinkDB
Position
14:complement(16716840..16719674)
AA seq 213 aa
MSTQTQGVKSPPLRGYRRRKTVLDLNAPPTEGRGDEGTSSRTEPQGVQASQQGQSLPPPT
IDVDVFDDDVIESSPTAFAEAKNNSRRARGRAVVVDVESGRTSRLSHNNLNKRRRVPPNQ
TIINCDLYINLEGGSSSSSRSMRENVQTLPPKEPTFNCPICLCPLVEEMSTKCGHIFCKT
CIADAIKRQAKCPTCRKRVTNKELIRVFLPATS
NT seq 642 nt   +upstreamnt  +downstreamnt
atgagcactcagactcagggggtgaagagtcctcctttaagggggtatcggcgaaggaag
acagtgctggacttaaacgcccctcctactgaagggaggggtgatgaagggacttcaagc
cgaactgaacctcaaggagtgcaagcaagccaacaaggacagtccttgccacctcctact
attgatgttgatgtgttcgatgatgatgtcattgaatcgtcacccacagcgtttgccgag
gctaagaacaattctcgaagagctcgtggaagggctgtcgttgttgatgtagagtcaggg
cgaacaagtagattgtctcacaataacctcaacaagcgtagaagagttccaccaaaccaa
acgattatcaattgtgatctttacatcaatttggaaggcggcagcagcagcagcagcagg
tctatgagggagaatgtgcagaccctgccgccaaaggagccaaccttcaactgtccaatt
tgcttgtgtccattggttgaggagatgtcaacaaaatgcggacacattttctgtaagact
tgcattgcagacgcaatcaaaagacaggctaaatgtcctacttgtaggaaaagggtcacc
aataaagaacttattagagtgttcctcccagcaaccagttga

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