Populus trichocarpa (black cottonwood): 7463467
Help
Entry
7463467 CDS
T01077
Name
(RefSeq) probable CoA ligase CCL5
KO
K10526
OPC-8:0 CoA ligase 1 [EC:6.2.1.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00592
alpha-Linolenic acid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
7463467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
7463467
NCBI-ProteinID:
XP_024466844
LinkDB
All DBs
Position
10:21260510..21262516
Genome browser
AA seq
566 aa
AA seq
DB search
MPAEELWTSIITEKEADNAQSKSGFNPKTGIYHSLHQLGENLQIPTRHDLDTSSYVLSQF
PHPDHAETKVALVDLATNQQITYAQLHRSIHALASGLYNGLGVRKGDVVFLLSPNSILYP
TICLAVFSIGAILSPANPANTISEILKQIRDSGAKLVISAPEELHKLVENGVPTLVTTRE
SNDDSLSVKELIECTGPLELPQVRITQSDTAAILYSSGTTGTSKGVILTHSNFIAIMTLL
KWSVYASSSQNDIFLCFVPIFHIYGLAFFRLGLFCAGITTVLMQRFDFQAMLDAVQAYKI
NNIPAVPPVILGLVKHANKVKCDLSSLRRVGSGAAPLSKELSDEFRQRFPWVELRQGYGL
TESCGATTFFISDEQAKAHPASCGRLVPTFSAKIVDTETGSALPPGRKGELWLKSPTIMK
GYLGNEAATAATFDPDGWLKTGDMGYFDEDGFLHIVDRIKELIKHNGYQVAPAELEAILL
GHPQVLDAAVIPVEDEEAGQIPMAYVVRTAGSELTEEKVIQFVANQVAPYKKVRRVGFIS
AIPKSAAGKILRKELVSHSQQVISKL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaagaattgtggactagtatcatcaccgagaaggaagctgacaatgctcaa
tccaagagtggtttcaatccaaaaaccggaatttatcactctttacatcaacttggagaa
aatctccaaatccccactagacatgacttagatacgtccagttatgtgctatcccagttc
ccccatcctgatcatgctgagactaaagttgcacttgttgatttggctaccaaccagcaa
atcacctatgctcagcttcatcgatctatccatgcccttgcatcaggcttgtacaatggt
cttggagtccgaaaaggtgatgtggtgtttcttctgtcaccaaactcaatcttgtacccg
acaatatgtctagctgtattttccattggagcaatccttagccctgccaacccagctaac
acaatatcagaaattttgaaacaaatacgggactcgggtgctaaacttgtcatctcagca
ccagaggagttgcataagttggttgaaaatggagtgcctacactagttacaactcgagag
tcaaatgacgattcactatctgtcaaagaactaattgaatgtactggtccgcttgagttg
ccacaggtcaggataactcaatcagacactgcagctatactatactcttcaggtactact
ggcacaagcaaaggtgtgatattaacacattcaaacttcatagccatcatgaccctcctg
aaatggtcagtctatgcaagttcatcgcaaaatgacatattcttgtgcttcgtcccaata
tttcacatctacggccttgcgtttttcaggttaggattattctgtgctggaattactact
gtgttgatgcaaagatttgattttcaagcaatgcttgatgctgttcaagcttacaaaatt
aataacattcctgcagtgcctccagtgatacttgggctagtgaaacatgctaacaaagtc
aagtgtgacttgtcatctttaagaagggtgggatctggggctgccccattgagtaaggaa
ctgtctgacgagtttaggcaaaggtttccatgggtagagctaaggcaaggatatgggcta
accgaaagctgtggtgcaacaacctttttcatctctgatgagcaggctaaggcacatcca
gcttcttgtggaaggctcgtgccaactttcagtgctaagattgtagatactgaaacggga
tcagctttgccacctggtagaaaaggagagctgtggttgaagagtcctactataatgaaa
gggtacttgggaaatgaggccgctactgctgcaacatttgatcctgatggttggctgaaa
actggtgatatgggttattttgatgaagatggatttcttcatattgttgatcggattaag
gagctgatcaagcacaatgggtatcaggtggctccggcggaattggaagctattcttctg
ggtcatccccaagtacttgatgcagcagttatacctgttgaagatgaagaagctggacag
ataccaatggcatatgtggtgagaacagctggttctgaactcacggaagaaaaagtcatt
caatttgttgctaatcaggtagccccatacaagaaagtacgaagagtgggtttcatcagc
gccattccaaagtctgctgcgggcaaaatcttgaggaaggagcttgtatcccacagccaa
caagttatctcaaaattgtaa
DBGET
integrated database retrieval system