Populus trichocarpa (black cottonwood): 7463481
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Entry
7463481 CDS
T01077
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7 isoform X2
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7463481
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
7463481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Beta-prop_WDR5
Beta-prop_WDR3_2nd
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
WDR55
Beta-prop_TEP1_2nd
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
WD40_Gbeta
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_Aladin
Beta-prop_EIPR1
Cytochrom_D1
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
7463481
NCBI-ProteinID:
XP_002315346
UniProt:
B9HUX3
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Position
10:21411005..21415321
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AA seq
537 aa
AA seq
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MGAKQENGDPEDILPPPEQELSHELDMKVKKYLRGEGADLEVLKDKKLKGQLYDRENLYG
KSAKAAAKTEKWLLPSEGGYLEAEGIEKTWRIKQDTIGREVDISSAKNQYDIVLPDFGPY
TLDFTSSGRYMAAAGRKGHLAVVDMKNMSLIKEMQVRETVRDVVFLHNELFFAAAQKKYP
YIYNRDGVELHCLKEHGAVTRLQFLKNHFLLASINKFGQLRYQDVTMGEMISNFRTGLGR
TDVMQANPFNGVVALGHSGGTVSMWKPTSAVPLVKMLCHPGPITAMAFHPDGHLMATSGK
EKKIKIWDVRKFEVLQTIRGHAKTLDFSQKGLLAAGTGSFVQVFGDFSGSRNYSRHMGHS
IVKGYQIGKVAFRPYEDVLGIGHSTGWSSILIPGSGEPNFDTWLANPFETTKQRREKEIH
SLLDKLPPETIMLDPSKIGTVKSAKKKEKPTKKEMEADMEAAVEAAKGTAIKNKTKGKNK
PSKIAVKKKEIVVRAKKPFLDQQMKEEENVAKKKQKISEEISLPTALQRFARKKATA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgaaacaagaaaatggtgaccctgaggatattttgcctcctcctgaacaagaa
ttatctcacgagttggatatgaaagtaaagaagtatcttagaggagaaggagctgatttg
gaggttttaaaagacaaaaagctcaagggtcaactttatgatagagaaaatttatatgga
aaatctgcaaaagctgcagccaagactgaaaagtggcttttgccaagtgagggaggctat
ctcgaggctgagggtatagagaagacatggaggatcaaacaggacacaatcggccgtgaa
gttgatatctcaagcgcaaagaatcaatatgatatagtcttgccagattttggtccatac
actctggattttacttcaagtggtcgatacatggcagctgctggtcgcaaggggcacttg
gctgttgttgacatgaagaatatgagcttaattaaagagatgcaggttagagaaacagtg
cgtgatgttgtgtttttgcacaatgagctgttctttgctgctgcccagaaaaagtaccca
tacatttataacagagatggtgtcgaacttcattgtttaaaggaacatggtgcagtgaca
aggcttcagtttctgaaaaaccactttctcttggcgtcaataaacaaatttgggcagctg
cgataccaagatgttacaatgggtgagatgataagcaatttccggacaggtttaggccgt
actgatgtgatgcaggccaatcctttcaatggggttgttgctttgggtcattcaggtggt
acagtaagcatgtggaagcccactagtgcggttccccttgtcaagatgctgtgtcatcct
gggcctatcacagcaatggcatttcatcctgatggccatctcatggccacgtctggcaag
gaaaagaaaattaagatttgggacgtgaggaaatttgaggttctccaaactataagaggc
catgcaaaaaccttggacttcagtcaaaaaggtttactagctgctggaactggatcgttt
gttcaggtttttggagatttctctggatcacggaattacagcagacatatgggtcattct
attgtgaaaggttatcagatagggaaagttgcatttcgaccatacgaagatgttctaggc
atagggcactccacgggatggtcttcaattcttatcccaggttcaggggaacccaacttt
gacacatggttagcaaacccatttgaaactactaaacaacgaagagagaaggaaattcac
tctcttctcgacaagctcccccccgagacaattatgctggacccttcaaagattggtaca
gtgaagtcagcaaagaagaaagagaaaccaacaaagaaggagatggaggcggatatggaa
gctgctgttgaagcagccaagggaactgccattaagaacaaaacaaaggggaagaataag
ccaagtaaaatagcagtaaagaaaaaggagattgttgtaagggccaagaaacctttcttg
gaccaacaaatgaaagaggaagaaaacgtggctaaaaagaagcagaaaatcagcgaggaa
atttcgttacctacggctttgcaaagatttgcccgtaagaaagcaacggcataa
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