KEGG   Populus trichocarpa (black cottonwood): 7463572
Entry
7463572           CDS       T01077                                 
Name
(RefSeq) tubulin alpha-3 chain
  KO
K07374  tubulin alpha
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04145  Phagosome
pop04517  IgSF CAM signaling
pop04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:pop00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    7463572
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    7463572
  09142 Cell motility
   04814 Motor proteins
    7463572
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    7463572
   03036 Chromosome and associated proteins [BR:pop03036]
    7463572
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pop04812]
    7463572
   04147 Exosome [BR:pop04147]
    7463572
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     7463572
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     7463572
Cytoskeleton proteins [BR:pop04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    7463572
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   7463572
  Exosomal proteins of other body fluids (saliva and urine)
   7463572
  Exosomal proteins of colorectal cancer cells
   7463572
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 7463572
NCBI-ProteinID: XP_002303998
UniProt: B9GY70
LinkDB
Position
3:complement(21455730..21458713)
AA seq 450 aa
MREIISIHIGQAGIQVGNACWELYCLEHGIQPDGVMPSDASVGVAHDAFNTFFSETGSGK
HVPRAIFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD
RVRKLADNCTGLQGFLVFSAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHALLEHTDVTVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPAS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGVDDEEDNEDYE
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagagaaataattagcatacacatagggcaagcagggattcaagtaggcaatgcttgt
tgggagctttactgtcttgaacatggcatccagccagatggagtgatgcctagtgacgct
tcagtgggtgttgcacacgatgcattcaatactttcttcagtgagactggttctggaaaa
catgtgcctagagctattttccttgacttggaaccaactgttattgatgaagttaggact
ggaacttatcggcaacttttccaccctgaacaacttatttctggaaaagaagatgctgcg
aataattttgctagaggacactatacagttgggaaggaaattgtggatctctgccttgat
cgagtgaggaagttggctgataactgcactggcttacaagggtttttagtgtttagtgct
gttggcggtggaacaggttctggtttggggtctttgctgttagaacgcttgtctgttgat
tacggaaagaagtcaaagcttggattcaccatttatccttctcctcaggtttcaacggca
gtcgtggagccttacaacagtgtactctctactcatgcccttcttgagcacacagacgtg
acagtgcttttggataatgaagctatatatgacatttgccgaagatccttggatattgaa
agacccacatacacaaatttgaaccgattgatatctcaaatcatatcatccttgacaact
tcgttgaggtttgatggagccataaacgtagacattacagagttccagaccaaccttgtt
ccttatccccgtatccatttcatgctttcttcatatgcccctgtcatatcagccgaaaag
gcataccatgagcagttgtcagttccagagatcactaatgctgtctttgagcctgcaagc
atgatggctaagtgtgatcctaggcatgggaaatacatggcctgctgtttgatgtaccga
ggagatgttgttccaaaggatgtcaatgctgctgtggccactatcaaaaccaaaaggact
gttcagtttgttgactggtgtccaactggcttcaaatgtggtattaactatcagccacct
actgtagtacctgggggtgatctcgccaaggttcagcgtgctgtttgcatgatcagcaac
aacacagctgtggctgaggtgttctctcgcattgaccacaaatttgatctcatgtactcc
aagagggcatttgttcactggtatgttggtgaaggcatggaagagggggaattctcagaa
gctcgtgaagatttggctgcccttgagaaggattacgaggaagttggtgctgaaggtgta
gatgatgaagaagacaatgaagattacgaataa

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