Populus trichocarpa (black cottonwood): 7463573
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Entry
7463573 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7463573
KO
K20222
importin-5
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
7463573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7463573
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
7463573
Pre-60S particles
7463573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
Importin_rep_4
HEAT
Importin_rep_6
HEAT_2
HEAT_EF3_N
TOR1L1_N
Vac14_Fab1_bd
IFRD
MMS19_C
Cnd1
DUF577
PDS5
Arm
HEAT_Maestro
Htt_N-HEAT_1
Adaptin_N
ParcG
RIX1
ARM_ARMC5
CEP104-like_TOG
TPR_TNPO3_IPO13_3rd
HEAT_GCN1
HEAT_IPO9_c
IBN_N
TPR_26
Phasin_2
HEAT_PBS
Motif
Other DBs
NCBI-GeneID:
7463573
NCBI-ProteinID:
XP_002304857
UniProt:
B9GY72
LinkDB
All DBs
Position
3:21441510..21450004
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AA seq
1114 aa
AA seq
DB search
MDESTQLQQAQLAAVLGGDPSQFETLISSLMSSSNETRSQAELIFNLAKQHDPNSLCLKL
AHLLQFSPHLDARAMSAVLLRKLLTRDDSYLWPRLSPQTQSSLKSILLACLQQESVKSNT
KKLCDTVSELASGILPDNGWPELLPFMFQCVTSDSFKLQESAFLIFAQLSQYIGESLIPF
IKELHGVFLQCLGSSTNFDVKIAALNAVINFIQCLDNSSDRDRFQDLLPSMIRTLTEALN
NGNEATAQEALELLIELAGTEPRFLRRQLVDVVGSMLQIAEAESLEEGTRHLAIEFVITL
AEARERAPGMMRKLPQFISRLFGILMRMLLDIEDDPAWHSAENEDEDAGETSNYSVGQEC
LDRLAISLGGNTIVPVASEQLPAYLAAPEWQKHHAALIALAQIAEGCSKVMLKNLEQVVT
MVLNSFYDPHPRVRWAAINAIGQLSTDLGPDLQNQYHQRVLPALAAAMDDFQNPRVQAHA
ASAVLNFSENCTPEILTPYLDGVVSKLLVLLQNGKQMVQEGALTALASVADSSQEHFQKY
YDAVMPYLKTILVNANDKANRMLRAKSMECISLVGMAVGKEKFRDDAKQVMDVLLSLQVS
QMESDDPTTSYMLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPDVTITSADSDNDID
DSDDESMETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAPTLVPLL
KFYFHEEVRKAAVSAMPELLRSAKLAIEKGLAQGRNESYVKQLSDYIIPALVEALHKEPD
TEICASMLDALNECLQISGVLVDEGQVRSVVDEIKLVITASSSRKRERAERAKAEDFDAE
EGELIKEENEQEEEVFDQVGEILGTLIKTFKASFLPFFDELSSYLTPMWGKDKTAEERRI
AICIFDDVAEQCREAALKYYDTYLPFLLEACNDDNPDVRQAAVYGLGVCAEVGGSVFKHL
VGEALSRLNVVIRHPNAKQPDNVMAYDNAVSALGKICQFHRDSIDSAQVVPAWLNCLPIT
GDLIEAKAVHEQLCSMVERSDRELLGPNNQYLPKIVSVFAEVLCGKDLATEQTLSRMVNL
LRQLQQTLPPATWASTLSVLHPQQQMALQSILSS
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtcaactcaactccagcaagcgcaactcgcggcagtccttgggggcgatcct
tcgcaattcgaaaccctaatctcttcgctcatgtcatcatccaacgaaactcgatctcaa
gcggagctcatcttcaacctcgccaaacaacacgatccaaactcgctctgtctaaaactc
gctcacctccttcagttctctcctcacctcgacgcccgtgctatgtccgctgtcctcctc
cgtaaactcctcactcgcgatgactcgtacctctggccgcgcctctctccgcaaacccag
tcctctctcaaatcgatcctcctcgcctgtctacagcaagagtctgttaaatcgaacacc
aagaagttgtgcgacaccgtttctgagcttgcttccgggattttgcccgataatggctgg
cctgagcttttgccgtttatgtttcagtgtgtgacgtcagattccttcaagttgcaggaa
tctgcgtttttgatcttcgcacagctgtctcagtatatcggagagagtttgattcccttt
atcaaggagttgcacggggtttttctgcagtgtttggggtcgagcacgaatttcgatgtc
aaaattgcggccttgaatgctgtgattaattttattcagtgtttggataattcgtccgat
agagatcgatttcaggatttgttgccgtcgatgataaggactttaacggaggctttaaat
aatgggaatgaggcgactgctcaggaggcgttggagttgttgattgagttggcggggacg
gagcccaggtttttgaggaggcagttggtggatgtcgtgggttcaatgttgcaaattgcg
gaggcggagagtttggaggaaggaactaggcatttggctattgagtttgtgattacattg
gcggaagctagggagagggcaccagggatgatgaggaagttaccgcagtttatcagtaga
ttgttcgggatactgatgaggatgttgttggatattgaggatgatccggcatggcatagt
gcggagaatgaggatgaagatgcgggggaaacaagtaattatagcgtggggcaagagtgt
ttggataggttggccatttctttgggtgggaatactattgttcctgttgcttcggaacaa
ttgcctgcgtatttggctgctcctgagtggcagaaacatcatgctgctcttattgcattg
gctcagattgctgaagggtgctctaaggtaatgctaaaaaacctggaacaagtagttaca
atggtcctaaattcattttatgacccccatccccgtgtgagatgggcagctattaatgca
attgggcagttgtccacggatttgggtccagatttgcaaaatcaataccatcagagagtt
ttgcctgcattagcagctgccatggatgattttcagaatcctcgtgttcaggcacatgct
gcttcggctgtgcttaacttcagtgagaattgtactccagaaattttaacaccgtaccta
gatggagtagtgagcaaattgcttgttcttctacagaatggaaaacaaatggtgcaagag
ggagcgttgactgctttggcatcagttgctgattcctctcaggagcacttccaaaaatac
tatgatgcagtcatgccttacttgaagactatcttggtgaatgcaaatgacaaagctaac
cgcatgcttcgtgccaaatccatggagtgcatcagtctagttgggatggcagtggggaaa
gagaagtttagggatgatgccaagcaggttatggatgtacttctgtcattgcaagtatct
cagatggagtcagatgatccaacaacaagttacatgctacaagcatgggccagactttgc
aagtgtttaggacaagattttcttccttacatgagtgttgtcatgccacctttgcttcag
tctgctcaactcaagcctgatgtaaccattacatctgcggattcagataatgacattgat
gattctgatgatgaaagcatggagactatcacccttggtgacaaaagaattgggatcaag
actagtgttctggaggaaaaagctactgcttgtaacatgttatgttgctacgctgatgag
ctgaaggaaggattctttccatggattgatcaggttgccccaaccttggtacctcttctt
aaattttattttcatgaagaggttaggaaagcagctgtttcagccatgccagaacttctg
cgttctgcaaaattagctatcgagaaagggcttgctcagggtcgcaatgagtcttatgta
aagcagctgtctgactatattattccagccctggttgaagcactgcacaaggaacccgat
actgagatctgtgcaagcatgttggatgccttaaatgaatgcttgcagatatctggagtg
cttgttgatgaaggtcaagtgcgatctgttgtggatgagataaaactggtcatcactgcc
agctcaagtcgcaagagagagagagcagagagagccaaagctgaagactttgatgcagag
gagggagagttgatcaaggaggaaaatgagcaagaggaggaagttttcgaccaagttggt
gaaatcttgggaactctgattaaaacattcaaagcttctttcttgcctttctttgatgag
ctatcatcctatcttactcccatgtggggcaaggataagactgctgaagagagaaggatt
gcaatttgcatttttgatgatgttgcggagcaatgtcgcgaggcggctcttaaatattat
gatacatatcttcctttcttactggaggcttgcaatgatgacaacccggatgttcggcag
gcagccgtatacgggcttggtgtttgtgcagaagttggtggttctgtgtttaaacatcta
gttggagaggctttatcaagacttaatgttgtaatacggcatcctaatgctaagcaacca
gacaatgtcatggcatatgataatgctgtttcagctttagggaaaatttgccagtttcat
cgtgacagtatagattcagctcaggttgttcctgcatggttaaactgtctgccaataaca
ggagacttgattgaagcaaaagctgttcatgaacaactttgttcaatggtggagaggtca
gatagagaacttttgggacccaacaatcagtatcttcctaagattgtttcagtatttgct
gaggttctatgtggtaaggatctagcaaccgaacaaactctaagccgaatggttaatctt
ctgagacaactacaacaaaccttaccaccagctacctgggcctcgaccttgtcggtgttg
catccacaacaacagatggcattgcaatccatcctctcatcataa
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