KEGG   Populus trichocarpa (black cottonwood): 7463622
Entry
7463622           CDS       T01077                                 
Name
(RefSeq) autophagy-related protein 8B
  KO
K08341  GABA(A) receptor-associated protein
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    7463622
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7463622
   04121 Ubiquitin system [BR:pop04121]
    7463622
   03029 Mitochondrial biogenesis [BR:pop03029]
    7463622
Membrane trafficking [BR:pop04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    7463622
Ubiquitin system [BR:pop04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   7463622
Mitochondrial biogenesis [BR:pop03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    7463622
SSDB
Motif
Pfam: ATG8 APG12 DUF2201
Other DBs
NCBI-GeneID: 7463622
NCBI-ProteinID: XP_002305568
UniProt: A9PA08
LinkDB
Position
4:complement(847413..849675)
AA seq 119 aa
MDRSSFKLDHTLERRQAEASRIREKYPDRVPVIVERAERSDIPDIDKKKYLVPADLTVGQ
FVYVVRKRIKLGPEKAIFVFVKNTLPSTASLMSAIYEENKDEDGFLYMTYSGENTFGLH
NT seq 360 nt   +upstreamnt  +downstreamnt
atggatagaagttcattcaagcttgatcatactttggagaggaggcaagcagaagcttct
cgcatcagagagaaatatcctgatagagtacctgtgattgtggaaagggctgaaaggagt
gatatccctgacattgataagaagaaatatctcgtgccagctgatttgactgtgggtcag
tttgtttatgttgtccggaaaaggatcaagctcggtcctgagaaggctatatttgtcttt
gtaaaaaacactctgccttctaccgcttcattgatgtctgcaatctatgaggaaaacaag
gatgaagatggttttctttacatgacatacagtggggagaatacctttggattgcactag

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