Populus trichocarpa (black cottonwood): 7463667
Help
Entry
7463667 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7463667
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
7463667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7463667
Spliceosome [BR:
pop03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
7463667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
7463667
NCBI-ProteinID:
XP_024458323
LinkDB
All DBs
Position
6:complement(655928..660508)
Genome browser
AA seq
557 aa
AA seq
DB search
MKNKREEDDMGSEVSGSVLKRQRVDEQSSASGIGNPLVPYNDVDDEDEDFERGKTNNGGG
VEESNTQVVAAENGEDEEEEEDVYGQGDSLERRKSQFEPREDCPYLDTVNRQVLDFDFEK
FCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEII
DPSLDDIRHVLNPRFTRDQVGQIDKNRQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQS
LMRVTPLRNFFLIPENYQHCKSPLVQRFGELMRKIWHARNFKGQVSPHEFLQAVMKVSKK
RFRIGQQSDPVEFMAWLLNTLHANLRTSKKNNSIIYECFQGELEVIKESPNKAITEKKQN
ADDQSSDQRITDGVTKHDIFTETSRMQFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILK
KFDGDTVTEVVRPRVARMKYRVTRLPRYLILHMQRFKKNNFFIEKNPTLVNFPVKNLELK
DFIPLPMPKENERLRSKYDLIANIVHDGKPNEGFYRVFVQRKSEELWYEMQDLHVSETLP
QMVALSEAYVQIYEQQQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaagagggaagaagatgatatggggagtgaagtaagtggtagtgttttaaag
aggcagagagtggatgaacagtcttcagcttctggtattggaaacccacttgtgccttac
aatgatgtggatgatgaagacgaggactttgaaagggggaaaacaaataatggtggtggg
gtggaggagagtaatacacaagttgttgcggcggagaatggtgaggatgaggaggaggaa
gaggatgtgtatggacaaggggatagtttggaaaggaggaagagtcaatttgagcctcgt
gaagattgcccgtatttggatactgttaatcgacaggtgttggattttgattttgagaaa
ttttgctctgtttctctgtcgaatttgaatgtgtatgcatgcttagtttgtgggaagtat
taccaaggaagagggaagaaatcccatgcttatactcatagtcttgaagcaggacaccat
gtgtacatcaatcttaggacagagaaggtttattgtcttcctgatggatatgagattatt
gacccatcacttgatgacatacgacatgttctcaatccaagatttaccagggatcaagtt
ggacagattgacaaaaacaggcaatggtccagggcacttgatgggtctgattaccttcct
ggaatggttggcctgaataacatcaaggaaactgattttgtgaatgtaacaattcagtct
ctaatgagagttacacccttaaggaatttcttccttatccctgaaaactatcagcattgt
aagtctcctcttgttcaacgctttggagaactcatgcgtaaaatatggcatgctcggaac
tttaaaggacaggtgagtccacatgaatttctccaggcagttatgaaagttagtaagaaa
cgttttcgaataggacaacagtctgatcctgtggagttcatggcatggcttcttaatacc
ctgcatgcaaatcttagaacttcaaagaaaaataacagtatcatttatgagtgctttcag
ggtgagttggaggttattaaagagagtcctaacaaagctatcactgagaagaaacaaaat
gctgatgatcaaagttctgatcaaagaattactgatggtgtaactaaacatgatattttc
acggaaacttctagaatgcaattcttaatgcttggactggatttgccaccacctcctctg
tttaaagatgtaatggagaagaatataatacctcaggttcctctgttcaatatactgaag
aaatttgatggtgatactgtgactgaagttgttcgtcctcgtgttgcccggatgaaatat
cgtgtcaccagattgccacgatatttaatactacatatgcagcgatttaaaaagaacaac
tttttcatcgagaagaatcccaccttagtcaactttcctgtgaagaacttggaattaaaa
gattttattcctttgccaatgcctaaagaaaatgagagattgcgctcgaagtatgatttg
attgcgaacattgtccatgatggaaagcctaatgaggggttctacagggtttttgtgcag
cggaagtcagaagagctatggtatgagatgcaggatctgcatgtttctgaaacccttcct
cagatggttgcgctctctgaggcatatgtgcagatatatgagcagcagcagtag
DBGET
integrated database retrieval system
