Populus trichocarpa (black cottonwood): 7463740
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Entry
7463740 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7463740
KO
K13210
far upstream element-binding protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7463740
03041 Spliceosome [BR:
pop03041
]
7463740
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
7463740
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
7463740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
7463740
NCBI-ProteinID:
XP_002324756
UniProt:
B9INI7
LinkDB
All DBs
Position
18:5499361..5506841
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AA seq
688 aa
AA seq
DB search
MADESTYSTATDTTPPSSNKRKFDDQSAPPPSTRRQTGFSSPISDPAPPPSYNSVPPPVD
EIQMAKQKAQEIAARIMSGAGADIKRPRAENGASGFDSVESNKGFSSAPPDMKSTISNSA
PSSIPASYGSYPGGSGLSKKIDVPQGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADP
NSPYRIVELMGTPEQIAKAEQLINDVLAEADAGGSGTISRRYAGQGGSEHFSMKIPNNKV
GLVIGKGGDSIKNMQARSGARIQVIPLHLPPGDTSTERTVHIEGTSEQVEAAKQLVNEVT
SENRMRNPNMGGGYPQQGYQARPPTSWGPSSGPPMQQAGYGYMQAGAYPGASAQYNTSQP
AYPGYPPQQPSGGYPPNWDQSSVSANQQNQGYDYYSQPPTSQQQTSGGAAAPADGTGYNY
SQAPASGYNQQGQGYSQDGYGGYQQPGYGQPPPYDQQQGYTSAPSYSNVANPAQEGHAPS
YGAQGDSAQGSSQPSAMGQQGYSTGQQPSPNPASYPPQGAAQPGYGLPPSSQSGYGSQPA
AQYGSYGAPQSQKPPANPPVYGQSQQSPTTPGSYGQPTGQPGYPHSQPLPSGYAQPDSGS
QSAPPSSYGAAGAQPGYAPPYGVPPAGQPGYGQGPPPYSGTSYGSGYSQPAAYSADSNAT
NNGRGTYESAPASQTAQQSGVAKASPQS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaatctacatactcgacagccacagacaccacaccaccatcgtccaataaa
cgcaaattcgatgaccaatcagcaccgcctccctcaactcggaggcaaacaggattctca
tctccgatttccgatcccgctccaccaccatcttacaacagcgtgccgccccctgttgac
gagatccagatggccaaacagaaagctcaggagatcgccgctcgtataatgagtggtgcc
ggtgctgatattaagcgacctagggctgaaaacggtgcgagtgggtttgactctgttgag
agtaataagggatttagctctgctcctccagatatgaagtctaccatatcaaactcagcc
ccttcgtcaattccggcttcatatggctcatacccgggtggttctggtttgagtaaaaaa
attgatgttccacaaggcagggttggtgttatcattggaaaaggtggagagactatcaaa
tatcttcagcttcagtctggagcaaaaattcaggtcactcgagacatggatgctgatccc
aactccccatataggattgttgagcttatgggtacacctgaacaaattgccaaggcagaa
cagttgattaatgatgtccttgcagaggctgatgcagggggttctggtacaatttcccga
aggtatgcaggacaaggtggttctgaacatttttcaatgaagattcccaataacaaggtt
ggtctggtcattggcaaaggtggtgattctattaagaacatgcaagctaggtctggagcc
cgtattcaggttatacctttgcatctgcccccaggtgatacatctacagaaaggacagtt
cacatagaggggacaagtgaacaagttgaggctgcaaaacagttggttaatgaagtcacc
agtgagaatcgaatgaggaatccaaacatgggtggaggttatcctcagcaaggatatcaa
gcacgaccacctacaagttggggtccatcgtctggtccaccaatgcaacaagctggttat
ggctacatgcaggctggagcataccctggtgcatcagcacagtataatacgtctcagcca
gcttatccaggctatcctccacaacaaccatctggtggatacccccctaactgggaccag
tcatctgtctcggcaaatcagcaaaatcagggttatgattactatagtcagccacctaca
tcccagcagcaaacttctggtggtgctgcagctccagcagatggcactggttataattac
agtcaggcaccagcttctggctataaccaacaagggcagggttatagccaagatggctat
ggtgggtatcagcagcctgggtatggtcagccaccaccttacgatcaacagcaaggttat
acttctgctcctagctacagcaatgtggccaacccagctcaagaaggacatgctccttca
tatggagctcaaggagattcagctcaagggtcatctcagccatctgcaatggggcagcaa
ggttattctactggccagcagcctagcccaaacccagcaagttatccacctcagggagct
gctcagcctggttatgggttgcccccatcttcccaatctggctatgggagtcaaccagct
gcacaatatgggagctatggagcacctcaatcacagaaacctccagccaatccacctgtt
tatgggcagagccaacagtcacccaccacccctggaagctatggccagcctactggacag
ccaggatatccacactcccagccacttccatctggctatgcgcaaccagattcaggttcc
cagagtgctccaccatcgagttatggtgccgcaggtgctcagccagggtatgctcctccc
tatggtgtcccaccagctggccaaccaggttatggacaggggcctcccccctacagcggc
acctcttatggtagtggttactctcagcctgctgcatattctgctgacagcaacgcaact
aacaatggtcgtgggacatatgaatcagcaccagcatcacagaccgcccaacagagtgga
gttgctaaagcatcacctcaaagttga
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