Populus trichocarpa (black cottonwood): 7463811
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Entry
7463811 CDS
T01077
Name
(RefSeq) heat stress transcription factor A-4c
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7463811
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
7463811
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
APG6_N
Suppressor_APC
DUF3450
AAA_23
Motif
Other DBs
NCBI-GeneID:
7463811
NCBI-ProteinID:
XP_002316809
UniProt:
B9I1G8
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Position
11:complement(6408094..6410432)
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AA seq
406 aa
AA seq
DB search
MDESQGTSNSLPPFLAKAYEMVDDPSSDSIVSWSQNNKSFVVWNPPEFARDLLPRFFKHN
NFSSFIRQLNTYGFRKIDPEQWEFANEDFIRGQPHLMKNIHRRKPVHSHSMQNLQGQGSN
LLTDSERQSMKDDIEKLKRDKQALILELQKQEQERKGFEMQIEGLKEKLQQTECIQQTIV
SFVARVLPKPGLALNIMPQLEGRDRKRRLPRIGYLYSEASNEDNQMVTSQALSRENADSN
SVALLNMEQFEQLESSLTFWENMVHDIGQTYNYNNSTIEMDDSTSGAQSPAISCVHLNVD
FRPKSPGIDMNSEPSAAVAPEPVSPKEQLAGTAPTVATGVNDVFWEQFLTENPGSTNAQE
VQSERKDSDGRKGEIKPVDPGKFWWNMRNVNNLTEQMGHLTPAERT
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatcacagggcacttcgaattcgctaccgccttttcttgcaaaggcatatgag
atggtggatgatccttcctcggattcaattgtttcatggagtcagaacaataagagtttt
gttgtatggaatccaccggagtttgccagggacttgctgcccagattttttaagcataat
aacttctctagcttcatcagacagctcaatacttatggttttaggaaaattgatcccgag
caatgggaattcgccaatgaggattttattagaggtcagccacatctaatgaagaacatc
catagacggaagccagttcatagccattcgatgcagaatcttcaaggacaagggtcgaat
ctgctaactgattctgaaagacagagtatgaaggatgatatagagaagcttaaacgtgat
aaacaagcacttattttggagttacaaaagcaggaacaagagcggaaaggatttgagatg
caaatcgagggtttgaaggagaagttacaacaaacggaatgcatacagcaaactatagtg
tcttttgtggctcgagtgttgccgaaaccaggtcttgcattaaatataatgccacaattg
gaaggtcgcgatagaaaacggaggctgcctagaattggttatctatacagtgaagcctct
aatgaggataaccaaatggtgacttcccaagctctgtctcgagaaaatgcagacagtaat
tctgttgccctgttaaacatggagcagtttgagcagttggaatcatcccttacattttgg
gagaatatggtacatgatattggtcaaacctacaactataacaattcaacgatagagatg
gatgactctacaagtggtgcacaaagtccagctatatcttgtgtgcatctgaatgttgat
tttcgtcccaaatcacctggtattgacatgaattctgagccctctgcagctgttgcacca
gagcctgtttcaccgaaggaacaactagccgggactgctcccactgtggccactggagtc
aatgatgtattctgggagcagtttttaactgagaatcctggttcaaccaacgcacaggaa
gttcaatctgaaagaaaggattctgatggtagaaaaggtgaaataaagcctgttgatccc
ggaaaattttggtggaatatgaggaatgtaaataatcttacagaacagatggggcatctt
actcctgctgaaagaacttga
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