KEGG   Populus trichocarpa (black cottonwood): 7463818
Entry
7463818           CDS       T01077                                 
Name
(RefSeq) ras-related protein RABA1d
  KO
K07904  Ras-related protein Rab-11A
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    7463818
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7463818
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7463818
   04031 GTP-binding proteins [BR:pop04031]
    7463818
Membrane trafficking [BR:pop04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    7463818
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   7463818
  Exosomal proteins of colorectal cancer cells
   7463818
GTP-binding proteins [BR:pop04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    7463818
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_22 AAA_16 Gtr1_RagA PduV-EutP ABC_tran TniB AAA_14 KAP_NTPase
Other DBs
NCBI-GeneID: 7463818
NCBI-ProteinID: XP_002317396
UniProt: B9I1H8
LinkDB
Position
11:6184795..6189147
AA seq 218 aa
MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK
VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV
VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDSAFAEVLTQIYRIVSK
KAMETGDEAAASAVPSKGEKIDVSKDVSAMKRVGCCSS
NT seq 657 nt   +upstreamnt  +downstreamnt
atggctggatacagagctgaagatgactatgattacctgtttaaggtagttcttattggt
gactcaggtgtgggcaagtctaatctgctttcaagattcactcgtaatgaattcagtttg
gagtctaagtctactatcggtgttgagttcgctactcgcagcttgaatgttgatggcaag
gtcattaaggcccagatttgggacactgctggccaagaaaggtaccgtgccataactagt
gcttactaccggggagcggtgggtgcacttcttgtgtatgatgttacccggcactcaaca
tttgaaaatgttgaaaggtggctaagggagttgagggatcatacagatcctaacattgtc
gtgatgctcattggcaataaatcagatcttcgccaccttgtggctgtctcaactgaggat
ggaaaatcctttgctgagagggagtcgctctacttcatggaaacatctgctttggaagct
actaatgttgacagtgcatttgctgaagtgcttactcagatctatcgcattgtgagcaag
aaagctatggagaccggtgatgaggcagctgcttcagctgttccatccaaaggtgagaaa
atcgatgttagtaaagatgtttctgctatgaagagagtagggtgctgctcaagctag

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