Populus trichocarpa (black cottonwood): 7463854
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Entry
7463854 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase BIG BROTHER
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7463854
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7463854
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7463854
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-RING_5
zf-RING_16
zf-C3HC4_3
zf-ANAPC11
DUF3905
VPS18_RING_C
zf_RING_Vps8_fungal
zf_RING_Vps8
zf-RING_Vps41
FAR1_N
zf-C3H2C3
zinc_ribbon_16
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
7463854
NCBI-ProteinID:
XP_006369632
UniProt:
B9GFF2
LinkDB
All DBs
Position
1:complement(28275366..28279418)
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AA seq
245 aa
AA seq
DB search
MNGNRQMEVHYMNTDFPYTTTESFMDFFEGLTHAPVNYAHNGPMHDQDNAYWSMNMNAYK
FGFSGLGSTSYYSPYEVNDNLPRMDVSRMAWEYPSVVSAEEPTTTDTQFEGDANMGVHAI
PEESISNQVSTNSPQALWQDDVDPDTMTYEELVDLGETVGTQSKGLSPELISLLPTSKCK
FGSFFSRKRSGERCVICQMKYKRGDKQIKLLCKHAYHSECITKWLGINKVCPVCNDEVFG
EESRN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggaatagacaaatggaagtgcattatatgaacaccgactttccttacactacc
actgaaagctttatggatttctttgaaggactaactcatgctccagtaaattatgctcac
aatggaccaatgcatgatcaggacaatgcatattggtcaatgaatatgaatgcatacaaa
tttggattttctggtctggggagtacttcttactatagtccatatgaggtaaatgataat
ttaccaagaatggatgtgagcaggatggcttgggaatacccttcagtagtgagtgctgaa
gagcccacaaccacagacacacagtttgaaggagatgcgaacatgggagtgcatgccata
cctgaagaaagcatttcaaatcaggtaagcaccaatagtccacaggctctttggcaagat
gatgttgatccagataccatgacatatgaggaattggtcgacctaggtgagactgttgga
actcaaagtaagggtctatctcctgagcttatcagcttgcttccaacctcaaaatgcaag
tttggaagcttcttctcaagaaaaagatctggggaaagatgtgtaatttgccagatgaaa
tataaaagaggggataagcaaataaaactgttgtgcaaacatgcttaccattctgaatgt
attaccaaatggcttggcatcaataaggtatgtcctgtttgcaacgatgaggtatttgga
gaggaatcacggaattaa
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