Populus trichocarpa (black cottonwood): 7463883 Help Entry 7463883           CDS       T01077                                  Name (RefSeq) E3 ubiquitin-protein ligase KEG   KO K16279   E3 ubiquitin-protein ligase KEG [EC:2.7.11.1 2.3.2.27] Organism pop  Populus trichocarpa (black cottonwood) Brite KEGG Orthology (KO) [BR:pop00001]  09180 Brite Hierarchies   09181 Protein families: metabolism    01001 Protein kinases [BR:pop01001]     7463883   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:pop04121]     7463883 Enzymes [BR:pop01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      7463883   2.7  Transferring phosphorus-containing groups    2.7.11  Protein-serine/threonine kinases     2.7.11.1  non-specific serine/threonine protein kinase      7463883 Protein kinases [BR:pop01001]  Serine/threonine kinases: TKL group   RIPK family [OT]    7463883 Ubiquitin system [BR:pop04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     7463883 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SH3_15 Ank_2 Ank Ank_4 Pkinase Ank_5 PK_Tyr_Ser-Thr Ank_3 zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_4 RING_XB3-XBAT31 zf-C3HC4_2 TRAF3_RING Motif Other DBs NCBI-GeneID:  7463883 NCBI-ProteinID:  XP_024449429 LinkDB All DBs Position 1:28841126..28853723 Genome browser AA seq 1620 aa AA seqDB search MADTRSRNGKKIPIPKCPICQTVYNDHSHTPLLLQCGHSFCLNCLSRLLLSSSPCKPSQK SSLTCPKCRHVSPLGNSLLFLPKNFSLLSSLLPSSSASDSDSDSSDDESDVNPRRFHCST TSGVGLAGNLCRDHELRIVKGISEVKWSGLLVKGKECKHKVVVRRVRVDDVADGNWVEKE LDNLRRKVMWCRNVCGFYGVVKSGEDDLCVVMEKCFGSVKEQMEGNGGRLSLDQILRYGA DIARGVIEIHAAGIVCLNLKPSNFLLDASGHVVVSDYGLPMILKKTSCSKGLLVPEADPL KTHWCIDCLSLSPYYSAPEAWEPLKKSLHLFRDGNIGISAKSDSWSFGCALVEMCTGFTP WAGLSAEEIYHAVVKEGRSPPQYEKVVGHGIPTELWKMIGECLQFKASNRPTFHAMLAVF LRHLQGIPRSPAIPNTEPANCSRIDMLEQSPTSVLDIFPVKSNHLHQLLSDGDVDGVRDL LAKSASGNDGNSVISLLEAHNADGQTALHLACRRGCLKLVGAILEYSDVDVDIHDKDGNP PIVFALAAGSPECVRSLIRRSDYATCRMSESIGRSVAHVCAYYGQPDCMLELLLAGADAN AVDDDGESVLHVAITNKHTECAIVILENSGCRSMSFLNSKNMTPLHLCIEALNVTVVKRW LEVASEEEIAGAIDLPSSVGTALCMAAALRKDHETEGRELVRLLLAAGANPAAQDAENHQ TALHTASAANDVELVKIILDAGVNANLRNVHGTIPLHLALAKGAKPCVELLLAAGADCNL QDEDGDNAFHIAAAAARLIRENLDCIILMLQCPNASIKIRNNSGKTLCDLLESLPREWIS EELLEALANKGVSLYPTVFEVGDWVKFKRGMKNPTYGWQGATCGSVGFVQSIPENGSLTV SFCTGVAHVLANEVVKVIPFDSGQLVQLKPDVIEPRYALHEQLRHSQGTVLCIEDEGFIR IGFRGASKGWQADPADFQRFEEFKVGDWVCVRKTPEAVKHDFGIVTAGSIGIVHGIRSDS SLLIEFSCVPAPCIFEPEEVEPVVPFKIGELVCVKRSIAEPSFAWGGETHHSVGRIFDIK SNGLLIIEIQNRSIPWTADPSDMEKVEDFKVGDWVRVKASVPSPKYGWDDVTRTSIGIVH NLEDDGDMGVAFSFRSRPFLCSMTDMEKVSPFKVGQEIRVMPSITQPLLGWSNESPATFG TVARIDMDGTLNVRVARRASLWKVAPGDAERLSGLAVGDWVRVKQCLGSRPSYEWNSFRK ENIAVVHSIQDSFHLDLVCCFRKGKLPAHCTEVEKVSHIKIGQHVRFRTGLVEPRWGWRG ACHNSRGVVTAVNIDGEIRVSFSGLHNLWRGDPADFEIDQMFEVGEWVKIKDSATGWKSL GPGSLGVVQGVRHQDDGWDGTFLVGFCGEPELWAGPACELETVDKLAVGQKVKVKPHVKQ PRFGWSGHTHESIGSISAIDLDGKLRIFTPAGSKVWMLDPSEVDVVEEEIIQIGDWVRVK SSIATPVYQWGEVTRDSIGVVHKMEEGELLVAFCFLDQLWVCKEWEMEKVRAFKVGDSVR FRERLVKPRWGWGMETCASKGQVVGVDANGKLRIKFKWREGRPWIGDPADIILDESSSFA NT seq 4863 nt NT seq  +upstreamnt  +downstreamnt atggccgataccagaagccgaaacggcaaaaagattccgataccgaagtgcccaatctgc caaacagtttacaacgatcactctcacacgcctctgcttctccagtgcggccactctttc tgtctcaattgtctctctcgcctcctcctctcttcctcaccttgtaaaccatcacaaaaa tcctcacttacctgtcctaaatgccgccacgtctcccctctcggcaactccctcctcttc ctccctaaaaacttctctctcctctcttccctccttccctcctcctccgcctccgactcc gactccgactcctccgacgacgagagcgatgtcaatcctcgtcgatttcattgttctaca acaagcggcgtcggattggctgggaatttgtgtagagatcatgaattgaggattgtgaag gggattagtgaggtgaagtggagcggtttgttggtgaaggggaaggagtgtaagcataag gtagttgtgaggagagttagggttgatgacgtggccgatggtaattgggtggagaaggag ctggataatttgaggaggaaagttatgtggtgtagaaatgtgtgtggattttatggtgta gtgaagagtggagaggatgatttgtgtgttgtgatggaaaaatgttttggttctgttaag gaacagatggaagggaatggcggccgcctctctctcgatcaaatcttaaggtatggagct gacattgcacggggggtaattgaaattcatgctgcgggtattgtgtgcctgaacttaaag ccgtccaattttcttcttgatgcaagtggtcatgtggtggtttctgattatggacttccg atgattcttaagaaaacttcttgctcaaagggtctgcttgtgcctgaggctgatccatta aaaacacattggtgtattgattgtttgtcgctaagtccatattattcagctccagaggca tgggagccattaaagaaatctttgcacttattcagggatggtaacattggcatatctgca aaatcagattcctggagttttggttgtgctctcgtcgaaatgtgcactggcttcactccg tgggctggtctaagtgcagaagagatctaccatgctgttgttaaggaaggaagatcacct ccacaatatgaaaaagttgtaggtcatgggattcctacagaactatggaagatgattggc gagtgcctacaatttaaggcatcgaacagacccacatttcatgcaatgctcgccgtattt ctgcgtcatttgcaaggaatacctcgaagtcctgcaattcctaatacagaacctgcaaac tgttccagaattgatatgctggaacaatctccgacatccgtcctggacattttcccagtc aaaagcaaccatctgcatcaacttttatctgacggggacgtggatggtgtcagagatctt cttgccaagtctgcatcgggtaacgatggcaactcagttatttctctgcttgaagcacat aatgctgatggtcaaactgcattgcacttggcttgtagacggggttgccttaaacttgtt ggtgccattttggagtacagcgatgtggatgtggatattcatgacaaagatggtaatcca ccaatagtgtttgctttagcagctggatccccagaatgtgtaagatctcttatcagaaga tcagattatgcaacttgtaggatgagcgaaagcattggccggtcagtagctcatgtctgt gcatattatgggcaaccagactgcatgttggaattacttttggctggtgctgatgccaat gcagtggatgatgatggtgaatctgtactgcatgtagccatcaccaacaaacatacagaa tgtgctattgtcatattggaaaatagtggatgcagatcaatgagttttctgaactcaaaa aatatgacacccctacatttgtgcatagaagctctaaatgtgactgttgtcaagaggtgg ctagaagttgcatcagaagaagaaatcgctggagccattgacctgcccagttcagttgga actgcattatgtatggcagctgctttaagaaaagatcacgagacagagggcagagagctg gtgagattacttcttgctgctggagcaaaccctgctgcccaagatgctgaaaatcatcaa acagctttgcatacagcttcggcagcaaatgatgttgagttggtcaagatcattcttgat gctggagtgaatgctaacctacgaaatgtgcatggtacaatacctcttcatttagcattg gctaaaggtgcaaagccttgcgtcgaattgctcttggctgctggtgcagattgtaatttg caggatgaggatggtgacaatgccttccatatagctgctgcggctgcaaggttgatacgt gagaatcttgactgtatcatccttatgctgcagtgcccaaatgcaagcattaaaattaga aacaacagtggtaagacgttgtgtgacctcctggagagcctgccccgagaatggatttca gaagagcttttggaagcactagctaataagggagtttctttatacccaacagtgtttgaa gttggagattgggtaaaattcaagaggggcatgaagaatccaacatatgggtggcaaggt gcaacgtgtggcagtgttggttttgtacagagtattccagagaatggcagtcttactgta tcattttgcacaggagttgctcatgtcttggcaaatgaagttgtaaaagtgattcctttt gacagtggccaacttgtgcaacttaaacctgatgttatagagcccagatatgcgttgcat gaacaattacgtcacagtcagggaactgttctgtgcattgaggatgaggggtttatacga attggttttcgcggtgcctctaaggggtggcaagctgatcctgcagattttcaaagattt gaagaattcaaggttggtgattgggtttgtgttcgcaaaacacctgaggctgtaaagcac gattttggaattgtgactgctggaagcatagggatcgtgcatggtatcagatccgatagt agtttgttgatagagttcagttgtgtacctgctccatgcatatttgaaccagaggaggtt gaaccagttgtgccttttaagataggtgagctagtatgtgtgaaacgatctattgcagag cccagctttgcttggggtggtgagacacatcatagtgttggaagaatatttgacataaag agtaatggtcttctgataatcgaaatacaaaatcggtccataccatggacggctgatcct tcagatatggaaaaggtggaggacttcaaggttggtgactgggttagagtaaaagcttcg gtaccctctccaaaatatgggtgggatgatgtcaccaggactagcattggtattgtccat aacttagaggatgatggtgacatgggtgttgctttctcctttagaagcaggccctttcta tgttcaatgacagacatggagaaggtgtcacctttcaaagtgggacaagagatccgtgtc atgccgtctatcactcagccattgcttggatggtcaaatgaaagtccagctacttttggg actgttgcgaggattgacatggatggaaccctcaatgtgagagtggctcgtagagcaagc ttatggaaagttgctccaggtgatgctgaaaggctctcaggactcgctgttggtgactgg gttagggtgaagcaatgtctggggtctagaccaagttatgagtggaacagttttaggaag gagaatatcgctgtagtgcacagtatacaggattcttttcatctagatttggtttgttgt tttcgtaaaggaaagttgcctgctcactgcacagaggtggaaaaggtttcacacataaaa atagggcagcatgttcgatttcgtactggactggttgaacctaggtggggatggagaggc gcatgccacaattcaagaggtgttgtaactgctgtaaatattgatggagaaataagagtt tcattctctgggttgcacaatttgtggcgaggagatcccgcggattttgagatagatcaa atgtttgaggtgggagaatgggtaaaaataaaagacagtgccaccgggtggaaaagtttg gggcctggaagccttggagttgtacaaggagtgaggcatcaagatgatggttgggatggt actttccttgttgggttctgtggcgaacctgaattatgggcaggaccagcatgtgagctt gaaactgtggataaacttgcagtaggccaaaaggtgaaggtgaagccccacgtaaagcag ccacgatttggttggtcaggccatacacatgagagcattggttctatatcagcgatagat ctagatggaaaactgaggatatttacaccagctggctccaaggtctggatgcttgatcca tcagaagttgacgtggtggaggaagagataatacaaattggagattgggtaagagtcaaa tcatctatagctaccccagtataccaatggggagaggtcactcgtgatagcattggagtg gtacacaagatggaggaaggagagcttttggtggcattttgcttcttggatcagctttgg gtttgcaaagaatgggaaatggaaaaggtaagggcatttaaggtaggtgacagtgtgaga tttagggaacgactggtgaagcccaggtggggatggggaatggaaacctgtgctagcaag ggccaagtagttggggtggatgctaatggaaagctacgaattaaattcaaatggagagaa ggacgaccttggattggagacccagcagatataattctcgatgaaagctctagttttgct tga

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