Populus trichocarpa (black cottonwood): 7464033
Help
Entry
7464033 CDS
T01077
Name
(RefSeq) coatomer subunit gamma isoform X1
KO
K17267
coatomer subunit gamma
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7464033
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7464033
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
7464033
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7464033
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
COP-gamma_platf
Coatomer_g_Cpla
Cnd1
HEAT_2
TOR1L1_N
AAA_chap_N
zf_Hakai
Motif
Other DBs
NCBI-GeneID:
7464033
NCBI-ProteinID:
XP_002313799
UniProt:
B9HRP1
LinkDB
All DBs
Position
9:9733547..9740321
Genome browser
AA seq
886 aa
AA seq
DB search
MAQPLVKKDDDHDDEAEYSPFLGIEKGAVLQEARVFNDPQLDPRRCSQVITKLLYLLNQG
DYFTKTEATEVFFSVTKLFQSKDFGLRRMVYLIIKELSPSADEVIIVTSSLMKDMNSKTD
MYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTNPEIVKRWS
NEVQEAVQSRAALVQFHALALLQQIRQNDRLAVSKLVTSLTRGTVRSPMAQCLLIRYASQ
VIRESANTQTGDRPFYDFLESCLRHKAEMVIFEAARAITELSGVTNRELTPAITVLQLFL
SSSKPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESS
VDRLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKA
IVDSIVILIRDIPEAKESGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTTDPSKYIRYI
YNRVHLENATVRAAAVSTLAKFGAMVDALKPRIFVLLRRCIFDSDDEVRDRTTLYLSTLG
GDGEVVETDRDTKTFLFGDLDIPLVNLETSLKNYEPSEEPFDIDSVPKEVKSQPLAEKKA
PGKKPTGLGAPPAGPPSTVDAYERLLSSIPEFSDFGKPFKSSAPVELTEAETEYAVNVVK
HIFDRHVVFQYNCTNTIPEQLLENVSVIVDSSEADNFAEVASKPLRSLPYDTPGQTFVAF
EKPKGITAVGKFSNTLRFIVKEVDPTTGEAEEDGVEDEYQLEDLEVVAADYMMKVGVSNF
RNAWESMGDEFEHVDEYGLGPRENLAEAVIAVINLLGMQPCEGTEVVATNSRSHTCLLSG
VFLGNVRVLARLQFGIHGSRDVAMKLAVRSEDEAVSDTIHEIVSSG
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacctctcgtgaaaaaagacgatgatcacgacgatgaagcagagtactctccg
tttttggggattgagaagggcgctgttcttcaggaagctagggtttttaatgatcctcaa
cttgatccgagaagatgctctcaggttatcacaaagcttctttatctactgaaccaagga
gattacttcaccaagactgaagccacagaagttttcttttccgtgacaaagcttttccag
tcgaaagattttggtttgaggagaatggtttatttgattataaaggaattatcgccatca
gcagatgaggttattattgtcacaagctccctaatgaaggacatgaatagcaagactgat
atgtaccgagcaaatgccattcgtgtgctttgtcggataacagatggaacccttcttacc
cagatcgaacgatatctgaaacaagcaatagttgacaagaatccagtagttgctagtgca
gccttggtcagtgggattcatttactccagacgaacccagagattgtcaaaaggtggagt
aatgaggttcaagaagctgtacagtcaagggctgcccttgtacaatttcatgcactggct
ttgctccagcagatacgacagaacgatcgacttgctgttagtaagttggttactagtttg
actaggggaactgttcgctcaccaatggctcaatgcctcttaatacgttatgctagtcag
gttattcgtgagtcagctaacacacaaacaggggaccgtcctttctatgattttctggag
agttgtctgcgccataaggctgaaatggtgatatttgaggctgccagagcaattacagag
ctcagtggtgtgacaaaccgagaattgactccagcgatcactgttctccagctcttcttg
agttcgtccaagcctgtgctgagatttgcagctgtccgtactttgaacaaggtggccatg
actcatcccatggctgtcacaaactgcaacattgatatggagagcttaatttctgaccag
aacagaagcattgccactcttgcaatcaccactctacttaagacaggaaatgaatcaagt
gtggatcgcttgatgaagcagataacaaatttcatgtcagatatagctgatgagttcaaa
attgttgttgtggaagccataaggtcactgtgtttgaagtttcccttgaagtatagatca
ttgatgaactttttaagcaacattctcagggaggaaggaggatttgagtacaaaaaggct
attgtagattcaattgtgatccttatcagagatatccctgaagcaaaggaaagtggttta
cttcatttgtgtgaatttattgaagattgtgaatttacctatctatccacacagatactc
cactttctggggattgaaggcccaaagaccacagatcccagcaaatacatacgctatatc
tacaaccgtgtgcatcttgagaatgctactgtccgggctgctgctgtgagcactctggca
aaatttggtgctatggttgacgcactgaagccacgaatttttgtcctgttgaggcgctgt
atctttgacagtgatgatgaggttcgtgatagaacaacactttatctcagcacacttggg
ggtgatggtgaagtggttgaaactgatagagacacaaagacttttctctttggagacctg
gatatccctcttgtgaatctggagacaagtttgaaaaattatgagccttctgaagagcct
tttgatattgattctgttccaaaagaagtcaagtctcagccgcttgctgagaagaaagcc
ccaggcaaaaagccaactggtcttggtgctcctccggctggtcctccatctaccgttgat
gcttacgaaaggcttctttcctctattccagagttttcggactttgggaagcctttcaag
tcctcggcacctgtggagcttacagaagcagaaacagaatatgcagttaatgttgttaag
cacatatttgataggcatgtcgtgttccagtacaactgcaccaacacgattcctgagcaa
ttattggaaaatgtctctgttattgtggattcgtcagaagcggataactttgcagaagta
gcatccaagcctttacgatctcttccttatgatacacctggacaaacctttgtggcattt
gagaagcctaagggaatcactgctgtaggaaagttttcaaacacattgaggttcattgtt
aaagaggttgatccaactactggtgaggcagaggaggatggcgttgaagatgaataccaa
ctggaggaccttgaggttgttgcagcagattacatgatgaaggtcggagtctccaatttc
aggaatgcttgggaaagcatgggagatgaatttgagcatgtggatgaatatggccttggc
ccaagggagaacttggctgaagctgttatcgctgtcatcaaccttcttgggatgcagcct
tgtgagggaacagaggttgttgcaaccaattcaaggtcacacacgtgtctactatctggt
gttttcctaggcaacgtgagggtgcttgcacggttgcagtttggaattcatggttctagg
gatgttgcaatgaaactggctgttagatctgaggatgaagccgtcagtgataccattcac
gagattgtatcaagcggctga
DBGET
integrated database retrieval system
