KEGG   Populus trichocarpa (black cottonwood): 7464063
Entry
7464063           CDS       T01077                                 
Name
(RefSeq) aladin
  KO
K14320  aladin
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    7464063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    7464063
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     7464063
SSDB
Motif
Pfam: Beta-prop_Aladin Beta-prop_THOC3 ANAPC4_WD40 WD40_WDHD1_1st WD40 Beta-prop_WDR5 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD40_Prp19 Beta-prop_RIG_2nd eIF2A Beta-prop_WDR3_1st Tricorn_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_1st Beta-prop_ELP1_1st PD40 Sod_Fe_N
Other DBs
NCBI-GeneID: 7464063
NCBI-ProteinID: XP_006373684
UniProt: A9PFC1
LinkDB
Position
16:1697837..1704148
AA seq 449 aa
MPSFPLQGSVTICEINRTLIVAEALSDDRAKDAYGKILGMVFSPIPFQPEQLGSTGENQE
SEHQERNNGESVERKGLMKSLQYLVNESIKRMFYPNCVHLLPEIDLQGVSWHQHRHIIAF
ISGPNQVIVRDYEDSEGKDACVLSNGAQQDIRALEWRPNGGKSLSVACKGGICIWAASYP
GNPATVRPGAASSLGTLTRGSGGRWTLVDFLRSHSDEQTSAISWSPDGRYLASASCESSS
FTIWDVSQGLGTPIRRGLGGISLLKWSPTGDYFFAAKFDGTFYLWETNTWTSEPWSSTSG
FVTGATWDPDGHIILIAFSGSLTLGSIHFSSKPPSLDAHLLPVDLPEITTMTGSEGIEKI
AWDASGERLAVSYKGGDDNYKGLVAIYDVRRTPLISASLVGFIRGPGDNPKPIAFSFHDK
FKQGPLLSVCWSSGFCCTYPLIFHSHSLP
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgccttcctttccactgcaaggctcagtcaccatctgcgaaatcaatcgaaccctaatt
gtagctgaagccttgtctgatgatcgagccaaggatgcttatggaaaaattctaggaatg
gtgttcagtccaattccgtttcaaccagagcagttgggatcgactggcgaaaatcaggaa
tctgaacaccaggaaagaaacaatggagagagtgttgagaggaaaggtttgatgaaatca
ttgcaataccttgttaacgagtcgatcaagcgcatgttttatcctaattgtgtacacttg
ttaccggagattgatcttcaaggagtgagctggcaccagcatagacatattattgcattt
atttcgggtccgaaccaggttatagttcgtgattatgaagattcagaagggaaggatgcc
tgtgttttaagcaatggggctcaacaagatattagggctcttgagtggagaccaaatggt
ggaaagtcactttctgtagcgtgcaagggtggaatctgcatatgggctgcttcttatcca
ggtaatccagccactgtgaggcctggtgctgcttcctccttgggaactcttactagaggc
tctggaggtcgatggactctagtggattttcttcgtagtcacagtgatgagcaaacaagt
gcaatatcatggagtcctgatggaagatatttggcatctgcatcatgtgagagctcttcg
ttcaccatatgggatgtctcacaaggtctggggacacccatacgacgtggattaggaggc
atatcgttactaaaatggtcacctactggagattacttttttgctgcaaaatttgatgga
acattttatctctgggagacaaacacatggacatctgaaccttggtcttcgactagtggc
tttgtcacgggagcaacatgggatcctgatgggcatataatattgattgctttctctgga
tctttaacattgggttccattcatttttcatcaaagcctccatctttagatgcacatctg
ttaccagttgatttaccagagataacaaccatgacgggcagtgagggaattgagaagata
gcttgggatgcttctggtgaaagactggctgtatcttataaaggaggggatgataattac
aaaggtcttgttgccatatatgatgttagaaggactcccctgatttctgcatcactagtt
ggatttattagagggcctggagacaatccaaagccaattgcattttcgtttcatgacaag
ttcaaacagggaccattgctttctgtgtgttggagcagtggattttgctgtacctatcct
ctaatatttcactcccatagtcttccataa

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