Populus trichocarpa (black cottonwood): 7464075
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Entry
7464075 CDS
T01077
Name
(RefSeq) tubulin beta-5 chain
KO
K07375
tubulin beta
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04145
Phagosome
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
7464075
09142 Cell motility
04814 Motor proteins
7464075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7464075
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
7464075
04147 Exosome [BR:
pop04147
]
7464075
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
7464075
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
7464075
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
7464075
Exosomal proteins of colorectal cancer cells
7464075
Exosomal proteins of bladder cancer cells
7464075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_2
Tubulin_3
Misat_Tub_SegII
Motif
Other DBs
NCBI-GeneID:
7464075
NCBI-ProteinID:
XP_002322609
UniProt:
A9PEU3
LinkDB
All DBs
Position
16:1884311..1887656
Genome browser
AA seq
450 aa
AA seq
DB search
MREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGSSDLQLERVNVYYNEASCGRFV
PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG
LAMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEEGEYDDEEEEEGQYAEQM
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatccttcacgtgcaaggtggtcagtgcggtaaccagattggttccaagttc
tgggaagttgtgtgtgatgagcatggaatagacccgactggaaggtatgttggttcttca
gatctgcagttggagcgtgtgaatgtgtactacaatgaggcttcttgtgggaggtttgtt
ccacgtgcagtgcttatggacttggagcctggtaccatggacagtgttcgtactggtccg
tatgggcagattttcaggccggataactttgtgtttggacaatctggtgctggaaacaac
tgggctaaggggcattacactgagggagcagagcttattgattctgttcttgatgttgta
aggaaggaggcagagaactgtgactgtcttcaaggtttccaagtgtgccactcattgggt
ggtggaactggttcgggaatgggcaccttgctcatctcaaaaatacgtgaggagtaccct
gacaggatgatgttgaccttctctgtttttccctccccaaaggtttcagatactgtggtt
gagccatacaatgccaccctgtctgtgcatcaacttgttgagaatgctgatgagtgcatg
gttctggataacgaggctttgtatgatatctgcttcaggactcttaaattgactactcca
agctttggtgatcttaaccacttgatttctgcaaccatgagtggtgtcacttgctgcctg
aggttccctggtcagctcaactcggacctccgaaagcttgctgtgaatctcattcccttt
cctcgtctccacttcttcatggttggttttgctcctttgacctctcgtggatcccagcaa
taccgtgccctcactgttccagaactgacccagcaaatgtgggattccaagaatatgatg
tgcgctgctgacccaaggcatggtcgctatctcactgcctctgctatgttccgtggcaag
atgagcaccaaggaagtggatgagcagatgatcaatgtccaaaacaagaattcgtcatac
tttgttgagtggattccaaacaatgtgaaatccagtgtctgtgacatcccaccaagggga
ctcgccatggcatccaccttcattggaaattccacctccatccaggaaatgttcaggaga
gtcagcgagcaattcactgctatgttcaggagaaaagctttcttgcattggtacactggt
gaaggtatggatgagatggagttcacagaagctgagagcaacatgaatgatctcgtgtcc
gagtaccagcagtaccaggatgccactgctgacgaggagggtgagtacgatgacgaggag
gaagaggagggtcagtatgcggagcagatgtga
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