Populus trichocarpa (black cottonwood): 7464258
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Entry
7464258 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7464258
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7464258
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
7464258
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
7464258
NCBI-ProteinID:
XP_052302071
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Position
12:1639808..1647699
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AA seq
1143 aa
AA seq
DB search
MPRSSRHKSSKHSSREYSDSEKDSSLKEKKAAKEESVSNNSSVRVSTEKRKLDLKENKES
LNGEYVEEYSSSSSKRRKERVEESNDRWNGGKEERGEKKGKEKGGEEKLKSKRRDESVEK
KSEGRHRESSRKEERERERVREKEKKGMEGRSEVEEYSRGGKQITEKTANDQLRSPESEN
RSDRRIRRKKDDSADGDKHHDDIGDANGKRLSSREDVKEEKPKDEKHKDDRYRDKYHEVV
DRENRHGDDKQRDERGARDYVNNRSEEKHIRDEKDASEVRKKSKPQDTDRDHDRERERDH
DRNRDRDREREHDRDRDRDCDQDHDWDLDRNRDQDRERDRDRDHGRNLDYDGSHIDDCSA
RYKDSRGRKRSPEDRDHYNDAKSKGTKAPYPDVEKKSLSSGRVESDDRGRSQSRQAHLDN
NVSSNRRRTSPDTSSHGAVEEHRHFKAEDLKYRDAVTKQRSKAISSREAADFSATSERAS
KHRSSDKPIKMDDGHVGELSIERSSSSRASPRGLVDRSPSSSLEHRYANRTGVRRSLDIE
ESARRRSGSISARNLPSAEDRLGRDLPLEKPLADDSTPADSSFYNRTNQNSSSLIPPSIF
RGGGGSPSFMGSLEEDSRGNTRYKRGGDPSLGRGQGNAWRGTPNWSSPMPNGYMPFQHGP
AHGGFQAMMPHFPSPPLFSARPSMEINHSGIPYHIPDADRFSGHLRPLGWHNMMDGSGPS
PMHGWDGNNGVFRDETHAFGQEWDQNRHQLNGQGWETGTDMWKAQNGDLNMDLPATSVKE
DFPVQAPLENVLAGQAGHLLQNENIHQMFQAENVETKLAVASAKEPSKFMSKTTHEKMPD
PSRTQSSDDSFHFARAYLSKLDISTELASPELYSQCMSLLSMEQSANADEDIIMLVNLKD
GARAVPKSSDSIFSLSLLPAVKDSVFQKAIEYYKKQRVGLSGLPIVNGGKIDAISTSKVK
DEPINDVHKAEELVLNQNEEMPDVPVLSLDQNKAEEVAIADTREISEELVSAPSLKEHAH
ACTSSQELPDQALVQQDCVEKPVEIYSGNKIDEVPSEPVNSGVAGSLPNPDYAPEADTIS
PAKGLDDNSLQCAEEGQGSGDTMCGPLFFSDDSPKASGALMPGSNESESVILSRIHHSPE
STR
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaagctctcgacacaaatcgagcaagcatagctcgagagagtattcggattcg
gagaaagattcgagcttgaaagagaagaaggcggcgaaagaggagagtgtcagtaataat
agcagtgttagggtttcgaccgagaagaggaagttagatttgaaggagaataaggaatct
ttaaatggggaatatgtagaggaatattcttcctcttcgtcaaagaggagaaaagagaga
gtagaggaaagtaatgataggtggaatggtggaaaggaggagaggggggagaagaagggg
aaggagaaagggggcgaggagaagttgaagagtaagaggagggatgagagtgtggagaag
aagagtgagggaaggcatagggagagtagtagaaaggaggagagggaaagggagagggta
agggagaaggagaagaaaggaatggagggtaggagtgaggttgaagagtattcgcgtgga
ggaaaacaaattactgaaaaaactgcaaatgatcaattgcgaagtcctgaatcagagaac
cggtctgatagacgaattaggagaaagaaagatgattctgctgatggggataagcatcat
gatgatattggagatgctaatggaaaacgattatcctcaagggaagatgttaaggaagaa
aaaccgaaggacgagaagcacaaggatgatcgatatagagacaagtaccatgaggtcgtg
gacagggaaaataggcatggagatgataagcaaagagatgagcgtggtgcaagagattat
gttaacaacaggtctgaagagaagcacataagggatgagaaggatgcttcagaagttcgg
aagaaatctaagccacaagacactgatcgtgatcatgaccgtgaaagagagcgtgaccat
gatcgtaatcgtgatagggatcgggagcgagaacatgatcgagaccgggatcgtgattgt
gaccaagatcatgattgggatttggatcgaaatcgggaccaagatagggaacgagaccgt
gacagagaccatggccgtaatcttgactatgatgggtcacatattgatgattgtagtgcc
agatacaaagatagcaggggaaggaaaagatctcctgaggatcgtgatcactataatgat
gctaaatccaaaggtacaaaggcaccttatcctgatgtggaaaagaaatctttgagcagt
gggagagttgagtcagatgacaggggaagatctcaatcacgtcaagcccatctagacaat
aatgttagcagcaacaggcggaggacttccccggacaccagttcacatggagctgttgaa
gaacacaggcatttcaaagcagaagatttgaagtacagggatgctgtgaccaaacagagg
tcgaaagcaatttcttcaagagaggctgctgatttttcagcaacatcagagagagcttcc
aagcataggtcatctgataaacctattaaaatggatgatggccatgtaggtgagttgtca
attgagaggtcttcaagttctagagcttcaccccggggcttggttgacagatctccttca
tcaagccttgagcacagatatgcaaacagaactggtgtcagacggagtcttgacattgaa
gaatcagcgaggaggagaagtggttccatcagtgctagaaatttgccttctgctgaagac
agactaggtcgggatttaccgttggagaagcctctagcagatgattcaactccagctgat
tcatccttttataatagaactaatcagaacagttcttctttgattcctccatccatcttc
aggggtggaggtggcagcccgtcttttatgggttcactagaagaagatagtagaggtaac
acccgctacaaaagaggcggcgatcccagtctgggaagaggccaaggaaatgcttggaga
ggtaccccaaactggtcttcaccaatgccaaatggctacatgcctttccaacatggacca
gctcatggaggttttcaagcaatgatgcctcattttccatctcctccgctgttcagtgcc
aggccttcaatggaaattaatcactctgggattccttaccatatacctgatgctgacagg
ttctctggtcatttgcgcccacttgggtggcataatatgatggatggatcaggaccttct
cccatgcatggatgggatggaaataatggtgtgtttagggatgaaacacatgcatttggg
caagaatgggatcagaataggcatcagttgaatggtcagggatgggaaactggcacggac
atgtggaaagcacaaaatggtgatttgaatatggacttgccagcaacttctgtgaaggag
gattttccagtgcaggcacctctggagaatgttctggctggacaagcaggtcacctgttg
caaaatgaaaacattcatcaaatgttccaagcagaaaatgttgaaacaaaattagctgtt
gcttcagcaaaagaaccttcaaaatttatgtctaaaactacccatgagaagatgcctgat
ccttctagaacgcaaagtagtgatgacagttttcattttgcccgtgcttatctttctaag
ctggacatttcaacagaacttgctagtccagagttgtatagccagtgtatgagtttgcta
agcatggagcagagtgcaaatgcagatgaagatattataatgcttgtaaatttaaaggat
ggtgcaagagcagtaccgaaaagttctgattccattttcagtctttcacttcttcctgct
gtaaaagattctgtttttcagaaagccatagaatactacaagaagcagagagtaggtttg
agtggcttgccaattgttaatggtggaaaaatagatgctatttcaacgtccaaagtgaag
gatgaacctattaatgatgtgcacaaagcagaggagctagttttaaatcagaatgaagaa
atgccagatgttccagtattgagtttagatcagaacaaagctgaagaggttgccattgct
gatacccgggagatatcggaagagcttgtttccgctcctagcctgaaggaacatgctcat
gcttgcacatcctctcaggaattgcctgatcaagctctcgttcaacaagattgtgtggaa
aagcccgtggaaatttatagtggtaataagattgatgaggtgccatccgaaccagtcaat
tcaggtgtggcgggcagcctcccaaaccctgattatgcacctgaagctgataccatttca
cctgctaaaggtttagatgataattctttgcaatgtgctgaagaagggcaggggtctggt
gatacaatgtgtggtcctttatttttttcggatgattctcccaaggcatccggggctttg
atgcctgggtcaaatgagtctgagtcggtaattttaagtcggatacatcattctcctgaa
agtacacgttga
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