Populus trichocarpa (black cottonwood): 7464270
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Entry
7464270 CDS
T01077
Name
(RefSeq) CLP protease regulatory subunit CLPX1, mitochondrial isoform X1
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
7464270
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP100
7464270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_5
AAA_22
Mg_chelatase
MCM
AAA_14
RuvB_N
Sigma54_activat
AAA_7
AAA_16
Sigma54_activ_2
T2SSE
IstB_IS21
TsaE
ABC_tran
AAA_18
AAA_29
AAA_28
RNA_helicase
nSTAND3
DEAD
AAA_30
ResIII
AAA_33
AAA_24
NACHT
Motif
Other DBs
NCBI-GeneID:
7464270
NCBI-ProteinID:
XP_052302030
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All DBs
Position
12:complement(1793925..1801397)
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AA seq
581 aa
AA seq
DB search
MAVAAVRGKPTKETASQFRYFMFNYMHVGSRLSSAHCASKTTKWDDHFANTPHHFTSFKP
VSLCGEFVEKGTQLLENMRSSGNSSKDFDRNWSQKVRYNSGDGSGYGDPPEVWEPPGDGV
AKLKVTDGGVNFKVGSRDGSGSKDGSWGGSKLGSSFPTPKDICKALDKFVIGQQRAKKVL
SVAVYNHYKRIHLESVKKCTTWEARCNADSGNEKAETMDEEEVELEKSNILLMGPTGSGK
TLLAKTLARFVNVPFVIADATTLTQARYVGEDVDSMLYKLLTAADYNVAAAQQGIIYIDE
VDKITKKAESVNISRDVSGEGVQQALLKMLEGTVVNVPDKEARKHPRGDNIQINTKDILF
ICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGVTSAAMTSSLLETAESSDLVSYGL
IPEFVGRFPILVSLSALTEDQLVQVLTEPKNALGKQYRKLFQMNGVKLHVTEHALRSIAI
KAITKNTGARALRSILENILMDSMYEIPDVRRGADIIDAVVVDEEAIGPKQRGAGAKILY
GRGALDHYLSKNKLKSSEATVEGSDGEPEVESELRKIVASM
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggccgttgctgcagttagaggcaaacccaccaaagaaactgcttctcaattcagatac
tttatgttcaattacatgcatgtgggaagtcgcttgtctagtgctcactgtgctagcaaa
actacaaaatgggatgaccattttgcaaatactcctcatcacttcacttctttcaagcct
gtttcgctttgcggggagtttgttgaaaagggtactcaattgttggaaaatatgagaagt
agcggtaattcaagtaaagactttgataggaattggagtcagaaagtgagatataatagt
ggtgatgggtctggttatggcgacccgccagaggtgtgggaaccacctggtgatggtgtt
gcaaaattaaaggtgactgatggaggagtgaattttaaggtagggagtagagatgggtct
ggttcaaaggatgggtcttggggtggatcaaagttggggagtagctttccaacgccgaag
gacatttgtaaggcacttgataagtttgtcattgggcaacagagagctaagaaggtgctc
tctgttgctgtttacaatcactacaagaggatccatctagagtctgttaaaaaatgtaca
acttgggaagctaggtgcaatgcagattcaggcaatgaaaaagcagaaaccatggacgag
gaggaagttgaacttgagaaaagtaacattcttctaatgggtccaacaggttcagggaag
acattacttgccaaaaccttggcgcggttcgtgaatgttccttttgttattgcagatgca
actactttgactcaggcaagatatgtcggggaagatgtggattcgatgttatacaaacta
ctgacagctgctgactataacgtggcagctgctcagcaaggcatcatttacattgatgaa
gttgacaagatcacaaaaaaggctgagagtgttaacattagtagagatgtgtcgggggag
ggtgtacagcaagcattattgaaaatgcttgaaggaacagtagtcaatgttccagataag
gaagctcgaaagcatcctaggggagacaatattcagatcaacacaaaggatattcttttc
atatgtgggggtgcctttattgatttggagaagaccatttctgaaaggcgccaagattca
tcgattgggtttggtgcaccagtacgtgcaaacatgaggacaggtggtgttacgagtgct
gccatgacatcatctttattggagactgctgaaagcagtgatcttgtttcatatggtttg
atacctgaatttgttggaagatttcctatcctcgtcagtttatcagctctcactgaggat
caacttgtccaggttctgacagaaccaaagaatgcccttgggaagcaatacaggaagttg
ttccaaatgaatggtgtcaagctacatgttacagaacatgctttgagatcaattgctata
aaagcaataaccaaaaatactggggctcgggccttgcggtccatattagagaacatcttg
atggattccatgtatgagattcctgatgtaagaaggggggctgatataatagatgctgtt
gtagttgatgaagaggctattggacctaagcaacgtggagccggagccaaaatcctgtac
ggcaggggtgcgttggatcactatctttcaaaaaacaaattaaagtcatctgaggcaact
gtggagggttctgatggagaaccagaggtggaatcagagcttcgtaagatagttgccagc
atgtaa
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