Populus trichocarpa (black cottonwood): 7464293
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Entry
7464293 CDS
T01077
Name
(RefSeq) MAG2-interacting protein 2 isoform X1
KO
K20473
neuroblastoma-amplified sequence
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7464293
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
7464293
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIP2_C
All-alpha_MIP2
Beta-prop_MIP2
Sec39
ARM_KNTC1_1st
Motif
Other DBs
NCBI-GeneID:
7464293
NCBI-ProteinID:
XP_002317800
LinkDB
All DBs
Position
12:2117697..2131365
Genome browser
AA seq
2414 aa
AA seq
DB search
MAEDEVLYETRLHISRPYTSNYPPLLHSNKVNQGGFLSIIKEKLSDYRNYNSKSSTEIRK
NLSLFISTRGDYVAVASANQITILSKENDYQQPHGSFTCRGGGVFTSGVWSEFHGVLGVV
DDSDTVYLIKVNGEEIMRISKRQLRASSSIVGLIPQDADDNDAQRSCLCRFVVITADGCL
HLIEMSKEPSASVLNSGLKSLGKFPKDVFCSDYSSECSLLVVVGSAVGISQSSVENAAGS
CLLSLWCRSRNLDLEPLISIQFEGLYSKSKDAILSCPKVLISPQGKFVATLDITGRLHIF
KMDKESRSLVSFACEEQLRSQGTSNITNGQNELLNDIVDFTWWSDRIMTLAKRGGILAML
DIVTGLKFQEHNHLYSMLVLDRIQQFQGRIFVLDSKVPSKPHRESGNVYNVEQVTGSRSD
QLDVSQLHWSLISLSKRSVPEMYNILISNCKYQAALDFANRHGLDRDEVLKSQWLHSSQG
KDGINMFLSNIKDHSFVLSECVDKVGPTEDAVKALLSYGLQVTDQFRFSESEADEGSQIW
DFRMARLQLLQFRDRLETYMGINMGRFSVQEYRKFRIIPVGEAAITLAESGKIGALNLLF
KRHPYSLSPSLLKILAAIPETVPLQTYGQLLPGRSPPPRIALREEDWVECEEMVNFINRL
PENHEIGTQIQTEPIVKRRLGYLWPSSSELSEWYKNRARDIDSFSGQLDNCIDLIDLACR
KGIYELQKFHEDILLLHQLIYSDENDVDACSNMSLISWEQLSDYEKFRMMLKGVKEENVV
KRLHDKAIPFMRNRFHNMTYFTQDQDTDCHFPSHENDSFVVKWLKEIALENKLDTCLMVI
EEGCRELHMNGFFKDEIEAVDCALQCIYLCTVTDRWSVMAALLSKLPQKQDVGISIEHLE
KRLKLAEGHIEAGRLLALYQVPKPMNFFLEAHADEKGVKQILRLILSKFVRRQPGRSDND
WANMWHDLQCLREKAFPFLDPEYMLVEFCRGLLKAGKFSLARNYLKGTSSVALASEKAEN
LVIQAAREYFFSASSLSCSEIWKAKECLNLFPSSRNVQTEADLIDALTVKLPYLGVTLLP
LQFRQIKDPIEIIKMAITSQAGAYLHVDELIEVAKLLGLNSSEDISTVQEAIAREAAVAG
DLQLAFDLCLVLAKKGHGHVWDLCAAIARGPALENIDIGSRKHLLGFALSHCDEESIGEL
LHAWKDLDMQGQCETLSILTGTSPSSFSDQGSSITSPPAYEETIDLKDYSELDGGASSGD
REVCFSNIKNTLSFVTKNCRVDSGTDLESFLWENGKLVSFASIQLPWLLELSKKADNGKK
FSTFIPGKHYVSIKTQAVVTILSWLAKNDYAPRDDVIASLAKSIIEPPVTEEEDIMGCSI
LLNLADAFSGVEIIEEQLRIRENYQEICSIMNVGMTYSLLHNSGVECKGPAQRRELLLRK
FKEKHKPPSSDEMTKIDVQSTFWREWKFKLEEKKHVAEQSRVLEKIIPGVETGRFLSGDL
DYIKSAIFSLIESVKFEKKHIIKDVLRLVDAYGLNHTEVLLRYLSSILVSEVWTDDDDVK
AEISEVKGEIISFGSETIKTISLVVYPTIDGCNKQRLACIYGLLSDCYLWLGESKKSSST
AHPNSPNLSALDVARLYKVFEQECHRVSFIKNLDFKNVAGLDGLNLQSFKNEVFSHVNES
SLEALAKMVQTLASIYADSLPEGLIVWQDVYKHYTMSLLTTLESRVRKECDVQNAERFQE
FMSQLEQTYDFCRTYMRLLSHSDSLDIMKRYFTVIIPLHSSHEIIPDNSTWQDCVIVLLN
FWLKLTEEMQEIALDESSVGTLRFDPEFLSSCLKVFMRMVMEDSVSPSQARGTVIGYASS
GLIGDFSVEIPIFCRAMLYSGCGFGAISEVFLESMSICAISSASTAKNESLDLPHLYVNM
LELILRNLVGGSHEHQNLYHLLSSLSKLEGQMENLQRVRHVVWERMAQFSDNLELPSHVR
VYVLEIMQFITGRSIKGFSTELNSNLLPWEGWDGLLSTGKKSNPSANQGSPDHTDNSSRF
TSTLVALRSSQLASAISPSIAITPDDLLNAETAVSCFLKLCESSSTEPHFDALIGILEEW
EGFFVTAKDEVDTTEATETGNDWNNDDWDEGWESFQEVEALEKEKPENSNHVHPLHVCWM
EIFKKLITLSKFKDVLRLIDCSLSKSYGILLDEDDARSLSHTVLEKDSFMALKMGLLLPY
EAIQLQCLNVVEDKLKQGGISGVLGRDHEVLMLVLSSGVISNIITKPSYGTTFSYLCYVV
GNFSRQSQEAQLSTITNKGANERVNIEKDVLLLFIRIMFPCFISELVKTDQQILAGFLIT
KFMHTNPSFSLINTTESSLSRYLERQLHALQQGDYFSLEEISSCEMFRNTVSRLTNKLGD
EIRSALPLLSSNAR
NT seq
7245 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagacgaagtgctttacgagacgcgtcttcacatctccagaccttatacttcc
aattaccctcctctcctacactccaacaaggtcaatcaaggcggtttcttgtccataatc
aaagagaaattgagtgattataggaattataattcaaaatcatcaacagaaattaggaaa
aatctatcgctgtttatatctacacgaggtgattacgttgctgtagctagtgctaatcaa
attacgattttgtccaaagagaatgattatcagcaaccgcacggaagcttcacttgtaga
ggtggtggtgtgttcacgagcggagtgtggtctgaatttcatggtgtcttaggagtagta
gatgatagtgatacggtttatttgatcaaagtgaatggggaagagattatgagaattagt
aagcggcagttgagagcaagttcgtcgatagtaggattgattccacaggatgctgatgat
aatgatgcgcagcggtcttgtttgtgtagatttgttgttattacagcagatggatgtctt
catttgattgagatgagtaaggagccaagtgcttctgttttaaatagtgggttgaagtcg
ctggggaagtttccaaaggatgttttctgctctgactatagttcggaatgttccttgctt
gttgttgttggtagtgcagttggtatctcgcaatcgtctgttgaaaatgctgctggatct
tgtcttctttctctttggtgtagaagtcgaaacttagatttggaaccattgatttctatt
cagttcgaaggcttgtattccaaatcaaaagatgccatactatcatgtccaaaggtgcta
atttcaccacaaggtaagtttgttgccactttagatataacaggacgcttgcacattttc
aagatggataaagaaagtcgatcacttgtgagttttgcttgtgaagagcaattacgttca
caaggaaccagtaacataacaaatggacagaatgagcttttaaatgatattgtggatttt
acttggtggtctgaccgcatcatgactcttgcaaaacgtggaggcattttggccatgctt
gatattgttactggcttaaagtttcaagagcacaaccatctatattcaatgcttgttctg
gataggatacagcagtttcaaggccgcatatttgttttagatagcaaagttccaagtaaa
cctcatagagagtcaggtaatgtgtacaatgtagagcaggtcacaggtagcagaagtgat
caacttgatgtttcccagttgcactggagcttgatctcactgtcaaagagatctgttcct
gaaatgtataatatcttaattagtaactgtaaatatcaagctgccttggactttgccaat
cgtcatggcttggacagagatgaagttttaaaatctcagtggctgcactctagccaagga
aaagatggtattaacatgtttttgtccaatatcaaggatcacagttttgtgctttctgaa
tgtgttgataaggttggaccaacagaagatgcggtaaaagctctactgtcatatgggctg
caagtgactgatcagttccgtttttcggaatcagaagctgatgaagggagccagatctgg
gattttcgtatggctagacttcagctgttacaattcagggacaggctagagacctatatg
gggataaacatgggcaggttttctgtacaggaatatcgcaaatttcgtattatacctgtt
ggtgaagctgccataacacttgctgaaagtgggaaaattggggccctaaacctcctcttc
aagcgtcatccttattcactatctccttcattgttgaaaatattagctgctattcctgaa
actgttcctcttcaaacctatgggcagcttcttcctgggagatctcctcccccaagaatt
gctcttagggaagaagattgggtagaatgtgaggaaatggttaactttatcaataggcta
ccagagaatcatgagattggtacccagatccaaactgagcccattgtcaagcggcgcctt
ggttatctttggccgtcatctagtgaactctctgagtggtacaagaacagagctagagat
attgatagctttagtggccagcttgacaactgcatcgacttgattgatttggcttgccgc
aaaggcatctatgagttacagaagtttcatgaggatattttattgttgcaccagctaatt
tattctgatgaaaatgatgttgacgcatgttctaatatgagtcttatctcctgggaacag
ttatctgattacgaaaaattcagaatgatgcttaagggagtgaaagaggaaaatgtggta
aagaggttgcatgataaggctattccatttatgagaaataggtttcacaacatgacctat
tttactcaagatcaggatacagattgccattttccttcgcatgaaaatgattcatttgtg
gtaaaatggctaaaggaaattgcattggagaataaactagacacatgcttgatggttatt
gaggaaggatgcagggaattgcatatgaatggtttcttcaaggatgagattgaggctgta
gattgtgctttgcagtgcatttatttgtgcactgttacagatagatggagtgtaatggct
gccttattgtcaaaactcccacagaagcaagatgtcggtatttctattgagcacctcgag
aaacgactgaagcttgctgaaggtcatattgaagcagggaggcttctggcactgtaccag
gttccaaagccaatgaatttcttccttgaggcccatgcagatgaaaaaggtgttaaacag
attcttcgtcttatactgtcaaaatttgttcgcagacagccaggtcgatcagataatgat
tgggcaaacatgtggcatgatttgcaatgcttgcgagagaaggcttttcctttccttgac
ccagagtatatgctagtggaattctgcagaggactgctgaaagctgggaaattttcactt
gctagaaattatctgaaaggtacaagttcagtagccttggcatcagagaaagcagaaaat
cttgttattcaagctgcacgggagtactttttctcagcttcaagtttgtcttgctctgaa
atctggaaggctaaggaatgccttaatttatttccaagtagcagaaatgttcagacagag
gctgatttaattgatgctctcactgttaaacttccttaccttggagtgactctacttcct
ttgcaatttaggcaaataaaggatcctatagagatcatcaaaatggcaatcactagccaa
gctggagcttatctacatgttgatgaactcattgaggttgccaaacttcttgggttgaac
tcttcagaagatatatctactgttcaggaagctattgctagagaagctgcagtggcaggt
gatctacaattggcatttgatctctgtcttgttctggccaaaaaagggcatggtcatgtt
tgggatctatgtgctgcgatagccaggggtcctgcccttgaaaatattgatataggctct
cgaaagcatttactaggttttgctttgagtcattgtgatgaggaatctattggtgagttg
cttcatgcgtggaaagatcttgacatgcaaggccagtgtgagacactgtcaatcttgact
gggacaagtccttcaagcttctcagatcaaggttcgtctataacatcacccccagcctat
gaagaaacaattgatcttaaggattactctgaactggacggaggagcaagcagtggagat
cgagaagtttgtttcagtaacattaaaaacacactttcttttgttactaaaaactgtcgt
gtggatagtggaactgatctggaatcttttttgtgggaaaatggaaaacttgtatctttt
gcctctattcaacttccatggttgcttgaattgagtaagaaagcagataatggtaagaaa
ttttctacctttattcctggtaagcattacgttagcataaaaacacaagctgtggtaact
atcctgtcgtggctggcaaaaaatgattatgctcccagagatgatgttatcgcctcactg
gcaaaatcaatcatagaaccacctgttacagaagaggaggatatcatggggtgctctatc
ttattgaatctcgcggatgcctttagtggagtagaaataatagaagagcagctaaggata
cgggagaattaccaagaaatttgtagcatcatgaatgtgggaatgacatacagtttatta
cataactctggagttgagtgcaagggtccggctcagaggagagagctgctgctgaggaag
tttaaagagaagcacaaaccacctagttcagatgaaatgaccaaaattgatgtacagtcc
acgttttggagggaatggaagtttaaattggaagaaaaaaaacatgtagctgaacaatct
agagtgttggagaaaatcattcctggagttgaaactgggcgttttctgtctggtgacctt
gactacattaagagtgctattttctccttgattgaatcagtaaagttcgaaaagaagcac
attataaaggatgtgttaagattggtcgatgcctatggcttaaatcacactgaggtgcta
ctaaggtatcttagttctatccttgtttctgaggtttggactgatgatgatgatgttaag
gctgaaatttcagaggtcaaaggagaaataattagctttggttctgaaaccatcaaaact
atttccttggttgtataccctacaattgatgggtgcaacaagcaacgccttgcttgtata
tatggcctcctctctgactgctacttgtggctgggagaatccaaaaaatcatcgtcaaca
gcacatccaaattcaccaaatttgtctgctcttgatgtagctcgtttgtacaaggtcttt
gagcaagaatgtcatagagtttcttttatcaagaacttagacttcaagaatgttgctgga
ttagatggtttgaatttgcagtctttcaaaaatgaagtcttttcacatgttaatgaatct
agcttggaagccttggcaaaaatggtacaaacattggccagtatctatgctgattcactg
cctgaaggtctcatagtgtggcaagatgtctacaaacattacacaatgagtttattgact
actttggaaagtagagttagaaaagagtgtgatgttcaaaatgctgaaagatttcaggaa
tttatgagtcaactggagcaaacctatgatttttgcagaacatatatgaggcttttgtca
cattcagattctttagatattatgaagcgatacttcacagtgattatacccctgcacagt
tctcatgagattatacctgataactcaacatggcaggattgcgtcattgttcttttgaac
ttctggcttaaattgacagaagaaatgcaggagatagcattagatgagagttcagtagga
acactgaggtttgatccagagttcttatcaagttgcctgaaggtttttatgaggatggtg
atggaggacagtgtttcaccaagtcaggccaggggcaccgtaattggttatgcaagttct
ggtttaattggagatttttctgttgagataccaattttctgcagagctatgttatattct
ggttgcgggtttggagccatttcagaagtattcttggaatcaatgtcaatctgcgccatc
agctcagcttcaactgctaagaatgaatccctggatcttcctcatctctatgtaaatatg
ttggagctgattctaagaaacttggttggtggatcccatgaacaccagaatctgtatcat
ttgttatcatctctgagtaagttggaaggtcaaatggagaatttgcaaagagtcaggcat
gtagtttgggaaagaatggcccaattctctgataatttggagctcccaagccatgttcga
gtatatgttctagagattatgcagttcatcacaggtagaagcattaagggtttctccaca
gagctaaattctaatcttttaccatgggaaggatgggatgggttgctctctactggtaaa
aagagcaacccttctgcaaatcaggggtcacctgatcatacagataattctagcaggttt
acaagtacactggttgccctcagatcatctcagctcgcatcagccatatccccaagcata
gcaattacccctgatgatctcttgaatgctgagactgcagtctcttgcttcttgaaattg
tgtgaatcttccagtacagagcctcatttcgatgctttgataggcattttagaagagtgg
gaagggttttttgtaactgcaaaagatgaggtagataccacagaagcaacagaaacagga
aatgactggaataatgatgactgggatgaaggatgggagagctttcaggaagtagaagct
ctggagaaagagaagccagagaattccaatcacgttcatcctttacatgtctgttggatg
gaaattttcaaaaagcttatcacgttgtccaagtttaaggatgtgctaagactgattgac
tgttccctatcaaaatcttatggaatattgcttgatgaagatgatgcgaggagcttgagt
cacactgtgcttgagaaagattcttttatggctctaaaaatggggcttcttctgccttat
gaagcaatacagttgcagtgtttgaatgtagttgaagacaagctgaaacaaggagggatc
tcaggcgtgcttggcagggaccatgaggtcttaatgctcgtgttatcttctggggttata
tcaaatataatcaccaaaccctcatatggcaccactttctcatatctctgctatgtggtt
gggaatttctcgcgccagagtcaggaagcccagttatcaacaatcacaaacaagggagca
aatgaacgtgtaaacatagagaaagatgtgttgttacttttcataagaatcatgttcccc
tgcttcatatcagagcttgtgaagacagatcagcagatcctagctggatttctcattaca
aaatttatgcacacaaatccttctttcagtctcataaacaccacagagtctagtcttagt
aggtacttggagaggcagctccatgcactacagcaaggcgactacttttccctcgaggag
ataagttcctgtgaaatgttcaggaatacagtctccagactgacgaacaagttgggagat
gagattcgatcggcattgccattgctttctagtaatgctagatga
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integrated database retrieval system
