Populus trichocarpa (black cottonwood): 7464317
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Entry
7464317 CDS
T01077
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03010
Ribosome
pop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
7464317
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
7464317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pop03011
]
7464317
04121 Ubiquitin system [BR:
pop04121
]
7464317
Ribosome [BR:
pop03011
]
Ribosomal proteins
Eukaryotes
Large subunit
7464317
Archaea
7464317
Ubiquitin system [BR:
pop04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
7464317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
zf-C4pol
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
DUF2604
UBL_UBAC1
Plexin_RBD
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
7464317
NCBI-ProteinID:
XP_002318470
UniProt:
A9PC21
LinkDB
All DBs
Position
12:complement(2401839..2403692)
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccctaactggcaaaaccatcactcttgaggtcgaatctagt
gatactattgacaatgttaaagccaaaatccaggacaaggaagggattcctcctgaccag
cagaggctgatctttgctggcaagcagctggaagatggacgtacccttgctgattacaat
atccagaaggagtcaacacttcatctggttctgaggcttcgtggtggaattatcgagcca
tctttgatggcattggccaggaaatataaccaggaaaagatgatctgccgcaaatgctat
gcacgcctgcatcctcgtgctgtcaactgcaggaagaagaagtgcggccacagcaatcag
ctgaggccaaagaagaagattaagtag
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integrated database retrieval system
