Populus trichocarpa (black cottonwood): 7464462
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Entry
7464462 CDS
T01077
Name
(RefSeq) probable ribonuclease P/MRP protein subunit POP5 isoform X1
KO
K03537
ribonuclease P/MRP protein subunit POP5 [EC:
3.1.26.5
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
7464462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7464462
03016 Transfer RNA biogenesis [BR:
pop03016
]
7464462
03029 Mitochondrial biogenesis [BR:
pop03029
]
7464462
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
7464462
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
7464462
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
7464462
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
7464462
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P_Rpp14
Motif
Other DBs
NCBI-GeneID:
7464462
NCBI-ProteinID:
XP_024442139
LinkDB
All DBs
Position
15:46579..50462
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AA seq
173 aa
AA seq
DB search
MVGFKNRYMVMEVFLDPNRDLGVDDPIIITQYNVSKAIKDSILVNFGECGLASSLGSFQV
KYVNPITKLCIIRTSREEYQKVWSAITMVRRIGNCPVLFNLLDLSGIGTFTQLFSLILLV
LVVLGSIKACKVAALKCDEMKFEHYKLAAGAPLSTDVNQHMQNCLEKIKILEH
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggtgggatttaagaatcggtacatggtaatggaagttttcttggatccaaatcgagat
cttggagtggatgatcctattataataacacaatataatgtttcaaaagcgattaaagac
agtattctcgtaaactttggggagtgtggtttggcttcatcccttggatcgttccaagtc
aagtatgtgaatccgattaccaagctatgtatcatcagaacctcacgagaggagtaccaa
aaggtctggtctgcaattaccatggttaggcgcattggtaactgcccagttctattcaac
ctgctagatctaagtggcattggaacttttactcagcttttctctttaattttgcttgtc
cttgttgttctaggaagtatcaaggcctgtaaagttgctgccttgaagtgtgatgaaatg
aaatttgagcactacaaacttgcagctggagcacctctctctactgatgttaatcagcac
atgcaaaactgtcttgaaaagatcaagattttggagcactga
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