Populus trichocarpa (black cottonwood): 7464525
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Entry
7464525 CDS
T01077
Name
(RefSeq) MAG2-interacting protein 2 isoform X1
KO
K20473
neuroblastoma-amplified sequence
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7464525
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
7464525
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIP2_C
All-alpha_MIP2
Beta-prop_MIP2
Sec39
ARM_KNTC1_1st
Motif
Other DBs
NCBI-GeneID:
7464525
NCBI-ProteinID:
XP_024441803
LinkDB
All DBs
Position
15:complement(510617..522545)
Genome browser
AA seq
2414 aa
AA seq
DB search
MAEDEVLYETRLHVSRPYTPNYPPPQHSNKVNRVGFLSIIKDKWSDYRNYNSNNSRLATR
IKRNLSLFISPRGEYVAVASANQITILSKENEYQQPHGIFTCSSGCVFTCGVWSETHGVL
GVVDDSDTVYFIKVNGEEITRISRRLLKVSSSIAGLIPQDDDDKDAQRRSCFFVIITADG
CLRQIEIGKEPSASVSNSEVKLPGKFPKDIFCFDYSSECLLLVAVGSAVGLSESTGGNSA
GSCILSLWCRSQNFDLEPLFSIQFEGLYSKSKDAILACPKVLISPLGKFVATLDISGCLH
IFKMDKESRSLLIFAGEEKLGSQGTSNLTNGQNELLSDVVDFTWWSDHIMTIAKRGGTVT
MLDIVTGLKFQEDDHLYSIIVLDRIQQFQGHIFVLDSKIPSNHSRESGDVHNVEQIMGGR
SDQFDVSQLHWSLISLSKISVPEMYHILISSLKYQAALDFANRHGLDRDEVLKSQWLHSG
QGKDDINMFLSKIKDHSFVISECVDKVGPTEDAVKALLSYGLHVTDQFCFSESKSDKGSQ
IWDFRIARLQLLQFRDRLETYMGINMGRFSVQEYSKFRVILVSEVATALAESGKIGALNL
LFKRHPYSLSPSMLKILAAIPETVPVQTYGQLLPGRSPPPRIALREEDWVECEEMVNSIN
RPPENHEIGIQLRTEPIVKLCLGYLWPSSSELSEWYRCRARDIDSCSGQLDNCLFLIDFA
CRKGISELQKFHEDILYLHQLIYSDENDADTCSNMSLISWEQLSDYEKFRMMLKGVKEEN
VVKKLHDRAIPFMQNRFHNIPFTKDQDIDGHFPSFHMDDSFLVKWLKEIASENKLDICLM
VIEEGCRELHDNGFFKDEIEAVDCALQCIYLCTVTDRWSIMAALLTKLPQKQDVGISIEG
LEKRLKLAEGHIEAGRLLALYQVPKPMKFFLEAHADEKGVKQILRLILSKFVRRQPGRSD
NDWANMWRDVQCLREKAFPFLDPEYMLVEFCRGMLKAGKFSLARNYLKGTSSVALASEKA
ENLVIQAAREYFFSASSLSCSEIWKAKECLNLFPNSRNVQTEADLIDALTVKLPYLGVTL
LPMQFRQIKDPMEIIKMAITSQAGAYLHVDELIEVAKLLGLNSSDDISTVQEAIAREAAV
AGDLQLAFDLCLVLAKKGHGPVWDLCAAIARGPALENIDIGSRKQLLGFALSHCDEESIG
ELLHAWKDLDMQGQCENLSILTGTIPSSFSDQGSSITSLPAHGIEEIVDLKDCSELVGGA
GSGDQEICFSNIKNTLSFVTKNWHVDSGTDLESFLRENGKLLSFATIQLPWLLELSKKAE
NGKKFSNFIPGKHYVSIRTEAGVTILSWLARNGFAPRDDVIASLAKSIIEPPATEEEDIT
GCSFLLNLVDAFSGVEIIEEQLKMRENYQEICSIMNVGMTYSLLHNSGVECKGPAQRREL
LLRKFKEKHKLPSSDEMTKMDEVQSTFWREWKFKLEEKRRVAERSRELEKIIPGVETGRF
LSGDLDYIKSAIFSLIESVKLEKKHIIRDVLKLVDAYGLNHTEVLQWHLNYFLVSEVWTD
DDIKAEISEVKEEIVGCGSETIKTISLVVYPAIDGCNKIRLACIYGLLSDCYLQLEETKE
SLSTAHPNSSNLSALELAHLYKVFEQECQRVSFINNLNFKNVAGLDGLNLQSFRNEVFSH
VDEFSVEALAKMVQALVSIYTDSVPEGLILWPDVYKHYVMSLLMNLENRVRTEFDVRNAE
KFQDFMSRLEQTYDFCRTYIRLLALSDSLDIMKQYFTVIIPLHDSHESIPDNSKWQDCLI
ILLNFWLKLSEEMQEMALNERSVGKFRFDPEFLSSGLKVFMRMMMEDSVSPSQVWGTLIG
YASCGLIGDFSVEIPIFCRSMLYACCGFGAISEVFLEAMSKCAISSAPTADNESLDLPHL
YINMLEPILRDLVGGSHDHQNLYQFLSSLSKLEGQIEDLQRVRHAVWERMAQFSNNLELP
SHVRVYVLEIMQFITGRNIKGFPTELESNLLSWEGWDGLISTSKKSETSANQGLPDHIDT
SSRFTSTLVALKSSQLASSISPRIEITPDDLVNIETAVSCFLKLCASSCTEPHFDALIGI
LEEWEGFFVTAKDEVDTTEAENCWSNDGWDEGWESFQDEEAPEKEKTENSNHVHPLHVCW
MEIIKKLIGLSQFKDVSRLIDRSLSKTYGILLDEDDARSLSQAVLEKDSFMALKMVLLLP
YEAIQLQCLDVVEDKLKQGGISDLAGRDHEFLMLVLSSGVISTIIAKPSYSTTFSYLCYL
VGNFSRQSQEAQSSTIMNKGTNEHVNTEKDVLLLFRRIMFPCFISELVKGDQQILAGFLI
TKFMHTNPSLSLINITEASLSRYLERQLHALQQADFSAEEIISCEMFKNTVSRLTIKLQD
LIQSALPLISSNAR
NT seq
7245 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagacgaagtgctttacgagacacgtcttcatgtctccagaccttacactcct
aattaccctcctcctcaacactccaacaaggttaaccgggtcggttttttgtcgataatc
aaagataaatggagtgattacagaaattacaattctaataattcaagattagcgacaaga
attaagaggaatttgtcgctgtttatatctccgagaggtgaatatgttgctgttgcaagt
gcaaatcaaattacgattttgtccaaagagaatgagtatcagcaacctcacggcattttc
acctgtagcagtggttgtgtgtttacgtgcggggtttggtcggaaactcatggtgtttta
ggagttgttgatgatagtgatacggtttattttatcaaagtgaatggggaagagattacg
agaattagtagacggctgttaaaagtgagttcgtcaatagcagggttgattccgcaggat
gatgatgataaggatgcgcagcggaggtcttgtttttttgttattatcacagcagatgga
tgtcttcgtcaaattgagattggcaaagagccaagtgcttctgtttcaaatagtgaggtg
aagttgccggggaagtttcctaaggatattttctgctttgactatagttcggaatgtttg
ttgcttgttgctgttggtagtgcagttggcctctcggaatcaactggtggaaattctgct
ggatcttgcattctttctctttggtgtagaagtcaaaactttgatttggaaccattgttt
tctattcagtttgaaggcttatactccaaatcaaaagatgccatactagcatgtccaaag
gtgctaatttcaccacttggcaagtttgtcgccactttagatatatcaggatgcttgcac
attttcaagatggataaagaaagccgttcacttttgatctttgccggtgaagagaaatta
ggttcacaaggaaccagtaacttaacaaacggacagaatgagcttttaagtgatgttgtg
gattttacttggtggtctgaccacatcatgactattgcaaaacgtggcggcactgtgacc
atgcttgatattgttactggcttaaagtttcaagaggacgaccatctatattcaattatt
gttttggatagaatacagcagtttcaaggacacatatttgttttagatagcaaaatccca
tctaatcatagtagagaatcaggtgatgtgcacaatgtagagcagatcatgggaggcaga
agtgatcaatttgatgtttcccagttgcactggagtctgatctcactttcaaagatatct
gttcctgaaatgtaccatatcttaattagtagtcttaaatatcaagctgccttggacttt
gccaatcgtcatggcttggacagagatgaagttttgaaatctcagtggttgcactctggc
caaggaaaagatgatataaatatgtttttgtccaaaataaaggatcacagttttgtcatt
tctgaatgtgttgataaggttggaccaacagaagatgctgtaaaagctttactttcatat
gggctgcatgtaactgatcagttctgtttttcagagtcaaaatctgataaagggagccag
atctgggattttcgtatcgctagacttcagctgttgcaattcagggacaggctagagacc
tatatggggataaacatgggcaggttttctgtacaggaatatagcaaattccgtgttata
cttgttagtgaagttgccacagcacttgctgaaagtgggaaaatcggtgccctaaacctc
ctcttcaagcgtcatccgtattcgctatctccttcaatgttgaaaatattagctgctatt
cctgaaactgttcctgttcaaacctatgggcagcttcttcctgggagatctccaccccca
agaattgctcttagggaagaagattgggtagaatgtgaggagatggtaaactctatcaac
aggccaccggagaatcatgagattggcatccagctccgaactgagcccattgtcaaactg
tgcctcggctatctttggccatcatctagtgaactttctgagtggtacaggtgtagagct
agagatattgatagctgtagtggccagcttgacaactgtctcttcttgattgattttgct
tgccgcaaaggcatctctgagttacagaagtttcatgaagatattctatacttgcaccag
ctcatatattcagatgaaaatgatgctgacacatgttccaatatgagccttatctcctgg
gaacaattatctgattatgaaaaattcagaatgatgcttaagggagtgaaagaggaaaat
gtggtaaaaaaactgcatgatagggcaattccatttatgcaaaataggtttcacaacatc
ccttttactaaagatcaggatatagatgggcattttccctcatttcacatggacgattca
tttctggttaaatggctgaaggaaattgcttcggagaataaactggacatatgcttgatg
gttattgaggaaggatgcagggaattgcatgataatggtttcttcaaggacgagatcgaa
gctgtagattgtgctttgcagtgcatttatttgtgcactgttacagatagatggagtata
atggctgccttattgacaaagctcccacagaagcaagatgttggaatatctattgagggc
cttgagaaacgactaaaacttgctgaaggtcatattgaagcagggaggcttttggcattg
tatcaggttccaaagccaatgaagtttttcctggaagctcatgcagatgaaaaaggtgta
aaacagattcttcgtcttatactctcaaaatttgttcggagacagccaggtcgatcagat
aatgattgggcaaacatgtggcgtgatgtgcaatgcttgcgagagaaggcttttcctttc
cttgacccagagtatatgcttgtggaattctgtagaggaatgctgaaagctgggaaattt
tctcttgcaagaaattatctgaaaggtacaagttctgtagccttagcatcagagaaagca
gaaaatcttgttattcaagcagcacgggagtacttcttctcggcttcaagtctctcttgc
tctgaaatctggaaggccaaggaatgccttaatttatttccaaatagtagaaatgttcag
acagaggctgatttaattgatgctctcactgttaaacttccctaccttggagtgactcta
ctacctatgcagttcaggcaaataaaggatcctatggagatcatcaaaatggcaatcact
agccaagctggagcttatctacatgttgatgaactcattgaggttgccaaacttcttggg
ttgaactcttcagatgatatatctactgttcaggaagctattgctagagaagctgcagtt
gcaggtgatctgcaattggcatttgatctctgccttgttcttgccaaaaaagggcatggt
cctgtttgggatctatgtgctgcaatagcaaggggtcctgcccttgaaaatattgatata
ggctctcgaaagcagctgctaggttttgctttgagtcattgtgacgaggaatctattggt
gagttgcttcatgcgtggaaagatcttgatatgcaaggccagtgtgagaatttgtctatc
ttgactgggacaattccgtccagcttctcagatcaaggttcctccattacatcactccca
gctcatggaatagaagaaatagttgacctcaaagattgctctgaactggttggaggagca
ggcagtggagatcaagaaatttgtttcagtaacattaaaaacacactttcttttgttact
aaaaactggcatgtggatagtggaactgatctggaatcttttttgcgggaaaatggaaaa
cttctatcttttgccactattcaactcccatggctgcttgaattaagtaagaaagcagaa
aatggtaagaaattttccaactttattcctggaaagcattatgtcagcataagaacagaa
gctggggtaactatcctgtcctggctggcaagaaatggttttgctcccagagatgatgtt
attgcctctctggcaaaatcaatcatagaaccacctgctactgaagaggaagacatcaca
gggtgctctttcttattgaatctcgtggatgcctttagtggagtagaaataatagaagag
cagctaaagatgcgggagaattaccaagaaatttgtagcatcatgaatgtgggaatgaca
tacagtttattacataactctggagttgagtgcaagggtccggctcagaggagagagctg
ctgctgaggaagtttaaagagaagcacaaactacctagttcagatgaaatgaccaaaatg
gatgaagtacagtccacgttttggagggaatggaagttcaaattagaagaaaaaagacgc
gtagcagaacgatctagagagttggagaaaatcattcctggagttgaaactgggcgtttt
ctgtctggtgaccttgactacatcaagagtgctattttctccttgattgaatcagtaaag
ttggaaaagaagcacattataagggacgtgttaaaattggtcgatgcctatggattaaat
cacactgaggtgctacaatggcatctaaattattttcttgtttctgaggtttggactgat
gatgatattaaggctgaaatttcagaggtcaaggaagaaatagttggctgtggttctgaa
accatcaaaactatctccttggttgtataccctgcaattgatgggtgcaacaagatacgc
cttgcttgtatatatggcctcctctctgattgctacttgcagctggaagaaaccaaagaa
tcattgtcaacagctcatccaaattcatcaaatttgtctgctcttgaattagctcatttg
tacaaggtgtttgagcaagaatgtcaaagggtttcctttattaataacctaaactttaag
aatgttgctggattagatggtttaaatttgcagtctttccgaaatgaagtcttttcacat
gttgatgaatttagcgtggaagccttggcaaaaatggtacaagcattggtcagtatctac
actgattcagtaccggaaggtctcatactgtggccagatgtctacaaacattatgtgatg
agtttattgatgaatttggaaaatagagttagaacagagtttgatgtcagaaatgctgaa
aagtttcaggactttatgagtcgactggagcaaacctatgatttttgtagaacatatatc
aggcttttggcactttcagattctttagatattatgaagcaatacttcacagtgattata
ccactgcatgattctcatgagagtataccagataactcaaaatggcaggattgcctcatc
attctcttgaacttttggcttaaattgagcgaagaaatgcaggaaatggcattaaatgag
aggtcagttggaaaattcaggtttgatccagagttcttatctagtggtctgaaggttttt
atgaggatgatgatggaggacagtgtttcaccaagtcaggtctggggcaccttaattggt
tatgcaagttgtggtttaattggtgatttttctgttgagataccaattttctgcagatct
atgttatatgcttgttgcgggtttggagccatttcagaagtattcttggaagcaatgtcg
aagtgtgccatcagttcagctccaactgctgacaatgaatccctggatcttcctcatctc
tatataaatatgttggagccgattctaagagatttggttggtggatcccatgaccaccag
aatttgtatcaatttttgtcatctctgagtaagttggaaggtcaaatagaggatttgcag
agagtcaggcatgcagtttgggaaagaatggcccaattctctaataatttggagctccct
agccatgttcgagtttatgttctagagattatgcagttcataacaggtagaaacattaag
ggcttccctacagagctagaatctaatctattatcatgggaaggatgggatgggttgatc
tctaccagtaaaaagagtgagacttctgcaaatcaggggttgcctgatcatatagatact
tctagcaggtttacaagtacactggttgccctcaaatcatctcagcttgcatcctccata
tcccctaggatagaaattacccctgatgatctcgtgaatattgagactgcagtctcttgc
ttcttgaagttgtgtgcatcttcctgtacagaacctcattttgatgcattgataggcatt
ttagaagagtgggaaggtttttttgtaacggcaaaagatgaagtagataccacagaagca
gaaaattgctggagtaatgatggctgggatgaaggatgggaaagctttcaggacgaagaa
gctcctgagaaagagaagacagagaattctaatcatgttcatcctttacatgtttgttgg
atggaaattatcaaaaagctcatcgggttgtcccagtttaaggatgtgtcaaggctgatt
gatcgatctctttcaaaaacttatggaatattgcttgatgaagatgatgctaggagcttg
agccaggctgtacttgagaaggattcttttatggctctaaaaatggtgcttcttctgcct
tatgaagcaatacagttgcagtgtttggatgtagttgaagacaagctgaaacaaggaggg
atttcggacttggctggcagggaccatgagttcttaatgctcgtgttatcttctggggtt
atctcaactataatcgccaaaccctcttacagcaccactttctcttatctctgctatttg
gttgggaatttctcacgccagagtcaggaagctcagtcatcaacaatcatgaacaaggga
acaaatgaacatgtaaacacagagaaagacgtgttattacttttcagaagaatcatgttc
ccctgcttcatttcagagcttgtgaagggcgatcagcagatcctagcaggatttctcatt
accaaatttatgcacacaaatccttctctcagtctcattaacatcacagaggctagtctt
agtaggtacttggagaggcagctccatgcactgcagcaagctgacttttctgccgaggag
ataatttcctgcgaaatgtttaagaatacagtctccagattgactatcaagttgcaagat
ctgatccagtctgcattgccattgatttctagcaatgctagatga
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integrated database retrieval system
