Populus trichocarpa (black cottonwood): 7464621
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Entry
7464621 CDS
T01077
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 1 isoform X1
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
7464621
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
7464621
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
7464621
NCBI-ProteinID:
XP_024465227
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Position
10:18173339..18178416
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AA seq
806 aa
AA seq
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MSVPQEHQSSTVDPPPPPPFDPTQPSIPISYPIKTLEDLGSRAYFKSFHCPFNICSVPLE
NSVLDNRPRVLVCHDMQGGYVDDKWIQGGSNPDAYAIWHWYLIDVFVYFSHNLVTLPPPC
WTNTAHRHGVKVLGTFITEWDEGKAICNKLLSTKESAHMYAELLSELAVALGFDGWLLNM
EVKLELGQIPNLKEFISHLTQTMHSSLPGSLVIWYDSVTIYGNLSWQNQLNDKNKPFFDI
CDGIFVNYSWKEDYPRSSAAVAGDRKFDVYMGIDVFGRNTFGGGQWMTNVALDVLKKDDV
SAAIFAPGWVYETKQPPDFQTAQNHWWSLVEKSWGAVKFYPKTLPFYSNFDQGHGYHISV
EGGQVSDAPWNNISSQGFQPFLKFTGNPSPDTIEVFVDFKEASYRGGGNITFKGTLEENT
DFTTIIFQGELLMDAVPLHITHSVKSEGDSLLGLSLHFSSAANERTSVLLASWGTNQFSR
KFSKIIAPCQVNKPRTAPGWAVLESSIEMNGYTLTEIHAVCYRPKHEHSQLRLEHRTDGS
EDTLTYSPKEYHAVLGHITMNTSKENTYFPPSSSWLVEGHYIKWSSGSQGSKTVSVKIDW
KSKDGTDSQFPKYNIYVEKLPKQAVRNHGVGLGGVQEYLGVANVEAFYVSELPIPATTSS
IKFIIQVCGVDGVCQNMDDSPYFQLDVKATTVGGRKMFQLFSYVERNNLVNPWAHSTNGQ
QLLGCKSHGKLGIRHFEWFDSLMCERSKAVIRGLLQSTSRMEIRELLRLPSRERKIWVIM
ILSMVFVILLCTLSNGKWGKETLVFP
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtaccacaagagcatcaatcctccaccgtggaccctcctcccccccctccattt
gatccaactcagccatccattcccatctcctaccctatcaagacccttgaagacttaggt
tctcgggcttacttcaagtcctttcactgcccttttaacatatgttctgttcctcttgaa
aattctgttttagataacaggcccagggttcttgtgtgccatgatatgcaaggaggttat
gtggatgataagtggatccagggagggagcaatcctgatgcttatgcaatttggcattgg
tatttgattgatgtgttcgtttacttttcacataatttggttactttgcctcctccttgc
tggactaatactgctcaccgacatggggttaaggtgttagggactttcatcacagaatgg
gatgaagggaaagctatctgcaataaactgctttcaacaaaagagtctgctcatatgtat
gccgagctgttgtcagagcttgctgttgctttgggttttgatggatggctgctcaatatg
gaggtaaaattggagttggggcagattcctaatttgaaagaatttatcagccatctaacc
cagaccatgcactcctcattgcctggatctttggtgatatggtatgatagtgttacaatt
tatggaaatcttagctggcagaatcaactgaatgataaaaataagccattctttgatatc
tgtgatggcatatttgtaaactattcatggaaggaagactacccaagaagctcagcggct
gttgctggtgatagaaagtttgatgtctacatgggaatagatgtgtttggaagaaacact
tttggtggtggacaatggatgacaaatgttgcattggatgtgctgaagaaggacgatgtg
tcagctgccatatttgcacccggatgggtctacgagactaagcaaccacctgattttcaa
actgctcaaaatcattggtggtcccttgtcgaaaaatcatggggagcagtaaagttttat
cctaaaaccctaccattttactcaaattttgatcagggccatggttatcatatttctgtt
gaaggaggccaagtgtcagatgctccttggaataacatttcttctcaaggctttcagccg
ttcctcaagttcactggtaacccaagtcctgatactattgaagtctttgtagatttcaag
gaagcatcttacagaggaggaggtaatatcacatttaaagggactcttgaagagaacaca
gattttacaacaataatctttcagggagagctgcttatggatgcagtgcctcttcacata
acacattctgtaaaatcagaaggggattctctactgggactttcacttcatttctcttcc
gctgcaaatgaaaggacgtcagtacttcttgcatcctggggaacaaaccaattctcaaga
aaattcagtaaaatcatagcgccctgtcaagttaataaaccaagaactgctccaggatgg
gctgtactggagagtagtattgaaatgaatggatacacattaacagaaattcatgctgtt
tgctacaggccaaagcatgagcattcccaactgaggttagaacatagaacagatggctct
gaggatacattaacgtatagtccaaaagagtatcacgcagtccttggtcacatcacaatg
aatacttctaaagagaatacatattttcctccctctagctcatggcttgtcgaaggtcat
tatatcaaatggagttcaggttcccagggttccaagaccgttagtgtcaagatcgattgg
aaatcgaaagacggaactgactctcagttccccaaatacaatatttatgtcgagaagtta
ccaaaacaagctgttcgaaatcatggtgtaggactaggaggggttcaggagtaccttgga
gtggcaaatgtagaagccttttatgtttctgaacttccaattcctgcaaccacttctagc
atcaaattcattattcaagtctgtggtgtagatggcgtttgccagaacatggatgattct
ccatattttcaactcgatgtcaaagcaacgacggtaggcggcagaaagatgtttcaactc
ttcagctatgttgaaaggaataacctagtaaatccgtgggcacattcgacaaatggacaa
caattactaggctgcaaaagtcatgggaagcttggtattcggcactttgagtggttcgac
tcactaatgtgtgaaagatcgaaggctgttattagagggcttttgcagagtacttcaaga
atggagatcagggagttgctgaggttgccctcaagagagaggaaaatctgggtcattatg
attctatctatggtttttgtcatacttctgtgcacattatcaaatgggaaatggggaaag
gaaactcttgtatttccctaa
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