Populus trichocarpa (black cottonwood): 7464622
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Entry
7464622 CDS
T01077
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 1
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
7464622
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
7464622
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
7464622
NCBI-ProteinID:
XP_024465230
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Position
10:18179311..18187285
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AA seq
717 aa
AA seq
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MLISLLRAYINRQTLVTLYNFLSRILNKMNSNAPPQDQESPTIDHPPQFDPSQPSIPISY
PIKTLEELETRSYFESFHCPFNKSSVPLKPKSLPNRPRLLVCHDMQGGYVDDKWVQGGTN
PDAYAIRHWYLIDVFVYFSHSLVTLPPPCWINTAHRHGVKVLGTFITEWDEGRLICNKLL
ATKESAQMYAERLAELAIDLGFDGWLINIEVNLLEEQIPNLEEFVSHLTHTMHSSMPESL
VIWYDSVITTGHLRWQDQLNEKNKPFFDICDGIFVNYTWKSNYPDLSAAVAGDRKFDVYM
GIDVFGRKTFGGGQWNTNVALDVLKKANVSAAIFAPGWLYETKQPPDFQTAQNRWWELVA
KSWGRVNNYPKLLPFYSNFDQGQGYHISVEGNQLTDAPWNNMSCQGFQPRLEFIDGPTPD
AIQFIVDFKEESYNGGGNITFKGTLEENVPFTIRLFQGELLLDNLHLVLTYSVKSKGDSL
LGLSLQFSSVLSEKIMVLVAPSEMNGLSHKFSKMIMPSQVSKMASKWIINEGTVAMDGFM
LTEIHAVCYRTKSTPGELRSEFRADNQDSAPAPSLAEYFAVLGHITIKNFSGNLFFPPST
SWLTESQYIKYSSISQGFKTVSLKIIWKLKDGNDFLFPKYNIYVEKLTKQVDGNATGTLV
DARVYLGAAHVQAFYMSDLSIPSHIGSLRFIIQACAADGTCQELDESPYMLLDVEGQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgctgatatctctccttcgtgcctacatcaaccgccaaaccctagtcactctctacaat
ttcctttctcgaatactcaacaaaatgaattccaatgcccccccacaagaccaagaatcc
cccaccattgatcaccctcctcaattcgacccatcacaaccctccattccaatctcatac
ccaatcaaaacccttgaagagcttgaaactcgttcttattttgaatcttttcattgccca
tttaacaaatcttctgttcctttaaaacccaagtctctgccaaataggcctaggcttctt
gtttgccatgatatgcaaggaggttatgtggatgacaagtgggttcaaggaggcactaat
cctgatgcttatgctattcggcattggtacttgattgatgttttcgtttacttctctcat
agtttggttactctgcctcctccttgctggattaatactgctcacagacatggtgtcaag
gtgttgggcacttttataacagaatgggatgaaggaagacttatttgcaataaattgctt
gcaacaaaggagtctgctcaaatgtatgctgagcgattggcagagcttgccattgatttg
ggctttgatggatggctgattaatattgaggttaatttgcttgaggagcaaattcctaat
cttgaagaatttgtgagccatctgacccatacaatgcattcctcaatgcctgaatctttg
gtaatatggtatgacagtgtcataaccaccggacatcttagatggcaagatcaactgaat
gaaaagaacaaacctttctttgacatatgtgatggcatatttgtaaactacacatggaag
agtaactatccagatctttcagctgctgtggctggagatagaaagtttgatgtctacatg
ggaatagatgtatttggaaggaaaacttttggtggtggacaatggaatacaaatgtcgca
cttgatgtactaaagaaggctaacgtgtcagctgccatatttgctcctggatggttatac
gagacaaagcaaccacctgattttcagactgctcaaaatcgttggtgggaacttgttgct
aaatcttggggaagagtaaacaattatcctaaattactacccttttactcaaattttgat
cagggtcaaggctatcatatttctgtcgagggaaaccaactaacagatgctccttggaac
aacatgtcttgccaaggctttcagcctcgtcttgagtttattgatggaccaactccagat
gctattcaattcattgttgacttcaaggaggaatcttataatgggggaggaaacatcaca
tttaaaggaactctcgaagagaatgttcctttcacaataaggctttttcaaggagagctt
cttttggacaacctgcatctcgtccttacatattctgtgaaatcaaagggggattcgctg
ctgggcctctctcttcagttttcatctgtattgagtgagaagataatggtacttgttgca
ccatcagaaatgaatgggttgtcgcacaaattcagtaaaatgattatgccaagtcaagtt
agcaaaatggcttcaaaatggatcataaatgagggtactgttgcaatggatgggttcatg
ttaacagaaatccatgctgtgtgctacaggacgaagtctacacctggtgaattgcgatcc
gaattcagagcagataaccaagatagtgctccagctcccagtctcgcagagtattttgca
gtgcttggtcacatcacgattaaaaatttctcagggaacttattttttcctccctcaact
tcatggctaaccgagagtcaatatattaaatatagctcaatttcgcagggattcaaaact
gtcagtttgaaaatcatttggaaactgaaagatggaaatgattttctgttcccaaagtac
aatatctatgtagagaaactaacaaaacaagttgatggaaatgcaactggaacactagta
gacgctagggtgtaccttggggcggcacacgttcaagcgttttatatgtccgacctttcc
attccctcacatatcggtagtctcagattcattatccaagcgtgtgctgctgatgggacc
tgccaggagctggacgaatctccgtatatgctactggatgttgaaggtcagtaa
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