Populus trichocarpa (black cottonwood): 7464668
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Entry
7464668 CDS
T01077
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a-like
KO
K11087
small nuclear ribonucleoprotein D1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
7464668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7464668
03032 DNA replication proteins [BR:
pop03032
]
7464668
Spliceosome [BR:
pop03041
]
Complex A
U1 snRNP components
Sm proteins
7464668
U2 snRNP components
7464668
Complex B
U1 snRNP components
7464668
U4/U6.U5 tri-snRNP components
7464668
Complex C
U2 snRNP components
7464668
DNA replication proteins [BR:
pop03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
7464668
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin7
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
7464668
NCBI-ProteinID:
XP_052309209
LinkDB
All DBs
Position
5:21243151..21246046
Genome browser
AA seq
108 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKGKNPVTLDHLSVRGNN
IRYYILPDSLNLETLLIEETPKVKPKKPTAGRPLGRGRGRGRGRGRGR
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttttgatgaagctgaacaatgagaccgtctcaattgaactgaag
aacggaactgttgttcacggaaccatcacaggtgttgatatcagtatgaacactcatctg
aaaacagtgaaagggaaaaatccagtaactttggatcatctcagtgtgaggggcaacaac
attcgttattacatccttcctgacagcttgaatcttgagactttgctgatcgaggagaca
cctaaggtcaaacctaagaagccaacagctgggaggcctctgggtcgcggtagaggccga
ggccgtggacgtggccgcggccgctaa
DBGET
integrated database retrieval system
