Populus trichocarpa (black cottonwood): 7464698
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Entry
7464698 CDS
T01077
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform X1
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00280
Valine, leucine and isoleucine degradation
pop01100
Metabolic pathways
Module
pop_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
7464698
Enzymes [BR:
pop01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
7464698
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Gene cluster
GFIT
Motif
Pfam:
MCCA_BT
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_3
HlyD_D23
RnfC_N
ATPgrasp_ST
ATP-grasp_3
NQRA_N
ATP-grasp_4
Motif
Other DBs
NCBI-GeneID:
7464698
NCBI-ProteinID:
XP_024457671
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Position
5:complement(21667305..21676095)
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AA seq
753 aa
AA seq
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MASMATILRRKLHDNRHFLIQTRLFSLESFSHDTKTTSRIEKILIANRGEIACRIMRTAK
RLGIRTVAVYSDADRDSLHVKSADEAVHIGPPPARLSYLNGSAIVEAAIRTGAQAIHPGY
GFLSESSDFATLCEDKGLTFVGPPASAIRDMGDKSASKRIMGAAGVPLVPGYHGSEQDIE
LMKSEADKIGYPILIKPTHGGGGKGMRIVQSPNEFVDSFLGAQREAAASFGINTILLEKY
ITKPRHIEVQIFGDKHGNVLHLYERDCSVQRRHQKIIEEAPAPNVMNDFRSHLGQAAVSA
AKAVGYHNAGTVEFIVDTVSGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQISVANGEPL
PINQSQVPLLGHAFEARIYAENVPKGFLPATGVLHHYRPVPVSPTVRVETGVEQGDTVSM
HYDPMIAKLVVSGENRAAALVKLKDCLSKFQVAGVPTNINFLQKLADHRAFENGNVETHF
IEHYKDDLFTDPNNLTRAKETYDNARFSATLVAACLCEKEHSAIKSSLPGTNGLLPIWYS
HPPFRAHYQASCTMELEWENEYDGSSSEFFTFSITYQSDGNYLIETEEVNSPGLEVKATL
LHDQDFRVETDGVSMDVSLSAYSKDKIKHIHLWHGSHHYHFRQKLELDLSDDNEIQQKTN
FETALHPPGTVVAPMAGLVVKVLVMDGTKVEEGQPILVLEAMKMEHVVKAPFSGHVHGLQ
VTAGQQVSDSSPLFSVKFPKTSVEWDHFPGQGE
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaatggcaaccatcctccgtcgaaaactccacgacaacagacatttccttatc
caaacacgactcttctccctcgaatctttctctcatgacaccaaaactacatcgcgcata
gagaaaatattgattgcaaacagaggcgaaatagcttgcaggatcatgcggaccgcgaaa
cgcctagggattcgaaccgtcgcggtttacagtgacgcggatagagactcgctccacgtg
aaatcggctgacgaggctgtccatatcggtccgcctccggctcggttgagttatttgaat
ggctcggcgattgtcgaggccgcgattcgtactggtgcacaggctattcacccgggttat
ggtttcttatccgagagttctgatttcgctacactatgtgaagacaaaggtctgactttt
gtcggaccaccagcatcggcaatccgggacatgggtgataaaagtgcatcaaagaggata
atgggtgcagcaggggtgccgcttgtgccaggttatcatggcagtgaacaagatattgaa
cttatgaagtcagaagcagataagattggataccctatcttaataaagccgacgcatgga
ggtggtggaaagggtatgaggatagttcaaagtccaaatgaatttgttgactcttttttg
ggagcacaacgtgaagcagctgcttcatttggtataaacacaattctgctagagaaatat
atcacaaagccaagacacatagaagttcagatatttggggacaaacatggcaatgtacta
catttatatgaaagggactgcagcgtacagagaagacatcagaagataattgaagaagct
ccagctccaaatgtcatgaatgacttccgctcccacttgggccaggctgctgtatctgca
gccaaggcagttggttaccacaatgctggcactgtggagtttatagttgacactgtgtca
ggccagttctatttcatggagatgaacacccgccttcaggttgagcatcctgtgactgag
atgattgttggccaagatcttgtagagtggcaaatatctgttgcaaatggagagccacta
cctattaatcagtcacaggtgcctttattggggcatgcctttgaagcccgaatatatgct
gaaaatgttccaaaaggatttcttcctgcaactggagttcttcaccattatcgtcccgtt
ccagtttcaccaacagttcgggttgagactggagttgagcagggggatactgttagcatg
cactacgatccaatgattgcaaagcttgttgtctcaggagaaaaccgtgctgcagcatta
gtcaaactgaaggattgcttatcaaaatttcaggttgcaggtgtgccaactaatatcaat
tttcttcaaaaacttgctgaccatagagcatttgaaaatggcaatgtggagacccacttt
attgaacattataaagatgacctctttactgatcctaacaatttaacgcgtgcaaaggaa
acatatgataatgctagattcagcgcaaccctggtagctgcatgtctttgtgagaaggag
cattctgctataaagtccagtctccctgggaccaatgggttactccccatatggtattct
catcccccttttcgagcccattatcaagctagttgtaccatggagcttgagtgggagaat
gaatatgatggaagcagctccgaattttttaccttctccatcacttatcagtcagatggg
aactatcttattgagacagaagaagtcaattcccctggtttggaagtcaaggcaacactc
ctgcacgaccaagattttagagttgaaactgatggtgtgagcatggatgttagtttatct
gcatattccaaggacaaaataaagcacattcatttatggcatggatcacatcattatcat
ttcagacaaaagttagagcttgacttgtctgatgataatgaaatacaacagaagaccaat
tttgagactgcattgcaccctccaggaactgtggtggctcccatggctggtttagtagtc
aaggttctggtgatggatggaacaaaggtagaagaagggcagcctatattagtactcgaa
gcaatgaagatggagcatgttgtgaaggctccatttagtgggcatgttcatgggcttcaa
gtgacagctggccaacaggtttctgatagcagtcccctcttcagtgtcaagtttcctaaa
accagtgttgaatgggatcatttccctggccagggtgaatag
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