Populus trichocarpa (black cottonwood): 7464706
Help
Entry
7464706 CDS
T01077
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
7464706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7464706
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
7464706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_22
AAA_14
AAA_16
AAA_2
TIP49
RNA_helicase
AAA_28
AAA_18
nSTAND3
AAA_17
AAA_33
Vps4_C
Mg_chelatase
Rad17
IstB_IS21
NPHP3_N
Viral_helicase1
AAA_25
AAA_11
ATPase_2
Bac_DnaA
TsaE
AAA_3
NACHT
NB-ARC
ABC_tran
Parvo_NS1
AAA_24
Nucleolin_bd
AAA_7
ATPase
AF-4
Cytidylate_kin2
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
7464706
NCBI-ProteinID:
XP_002319947
UniProt:
B9I6K0
LinkDB
All DBs
Position
13:complement(14792769..14797875)
Genome browser
AA seq
819 aa
AA seq
DB search
MGSGRRRSGGGGGGSGGGRNQRLLKHHIDTCNKKFTTTDDIVHHLRNSYPNYRRMELKTL
TRIVQQTLNQQTPPPKKFRKHELETESDSDDEEANLSKKQKRIDESEEKLMQIENAHSRR
RNRNRGPILVSSSDTESSSESDSGSDSSTSLEPPKFDLMKSMLRESYGVAEKNMEVELAN
DRKESITSKVDMIERNRGVGKQKGEDLEGSLGKLKGGLGEDAKGKEGGPRFKDLGGLSGI
LEELEMEVFLPLYHPNVPLRLGVSPISGILLHGPPGCGKTKLAHAIANETGVPFYKISAT
EVVSGVSGASEENIRDLFSKAYRTAPSIIFIDEIDAIASKRENLQREMERRIVTQLMTCM
DEHHRLGQPSDDSSSSESSNRIPGNVLVIGATNRPDAVDPALRRPGRFDREINLGVPDEK
ARVQILSVLTKNCTLEGSLDILQIARSTPGFVGADLNALVNMAGNLAMRRVASQRKSELS
GQLTEKEDNEDWWKQPWSPEEMEKLAITMADFEKAAKLVQPSSKREGFSTIPNVKWEDVG
GLDDIRDEFDLYIISRIKYPDDYQKFGVNLETGILLYGPPGCGKTMIAKAAANEAGANFI
HVKGPELLNKYVGESELAVRTLFSRARTCSPCIIFFDEVDALTTMRGKEGGWVVERLLNQ
LLIELDGADQRPGIFIIGATNRPEVMDPAVLRPGRFGKLLYVPLPSSEDRGLILKALAKG
KPIDPSVDLAAIGQMEACKNLSGADLRKLMEEAAMTALKEAKRQRCLNETSGTITAAQNE
PAVNITATHFEQALGKISPSVSEKQIQYYKAWSESFKAT
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcggaagaagaagaagcggcggtggtggcgggggaagcgggggaggaagaaac
caaagactgcttaaacaccacatagacacctgtaacaaaaaattcaccacaacagacgac
atagtccaccacctccgcaatagctaccccaattaccgccgcatggaactcaaaacccta
actcgcatcgtccagcaaaccctaaaccaacaaacaccgccgccgaagaaattcagaaaa
catgaattggaaacagaatccgattccgacgacgaagaagcaaaccttagtaagaagcag
aagcgaattgatgagagtgaagagaaattgatgcagattgaaaatgcgcattctagaaga
aggaatcgaaatcggggcccgattttggtttcgagctcggatacggagtccagttcggag
tcggattcgggttcggattcttcgacgtcattagagccaccgaagtttgatttgatgaaa
tcaatgttaagggaaagttatggggtggcggagaaaaatatggaagttgagcttgctaat
gatagaaaagaaagtattactagtaaagttgacatgattgagagaaatagaggggtagga
aagcaaaaaggagaggacttggagggtagtttggggaaactgaaaggtgggcttggtgag
gatgcgaaggggaaggaaggggggccgaggtttaaggatttagggggtttgagtgggatt
ttagaggagttggaaatggaggtgtttttgccattgtatcatccaaatgtgccgctgaga
cttggggttagtcctataagtgggattttgttacatgggccacctgggtgtgggaagact
aagttggctcatgctattgcgaatgagactggggtgcctttttacaagatttctgctact
gaggttgtttctggtgtttcaggtgcatcggaagaaaatatccgagatcttttctctaaa
gcatacaggactgcaccatctatcatttttattgatgagatcgatgcaattgcttcaaag
agagagaatttacagagagagatggagagaaggattgtgacacaattgatgacttgcatg
gatgaacatcacaggctaggacaaccatctgatgacagttcaagttcagaaagctctaat
cgaatacctggaaatgttcttgttattggagctacaaataggcctgacgctgttgaccct
gcactaaggaggcctgggagatttgatcgcgagattaatttaggtgttccggatgagaaa
gctagggttcaaattctttcagtgcttactaaaaattgtactcttgaaggttctcttgat
attttgcaaatagccaggtctacaccaggttttgttggagctgatttgaatgctttggtt
aacatggctggtaatcttgcaatgaggagagttgcttcccagagaaaatctgagctatca
ggacaattgacagagaaggaagacaatgaggattggtggaagcaaccttggtcgcctgag
gagatggaaaagcttgccatcacaatggctgatttcgagaaagcagccaagctagttcag
ccctcatcgaaaagagaaggattctctactatccctaatgtcaaatgggaagacgttggt
ggccttgatgatataagggatgagtttgacctctatatcattagtcgtataaagtatcct
gatgattatcagaaatttggagtgaatttagagacagggattttgctctacggacctcct
ggctgtggcaaaacaatgatcgctaaggctgctgctaacgaggcaggagctaacttcatt
catgtgaagggtcctgaacttctgaataagtatgttggagaaagcgaactggcagttagg
acgttattcagtcgtgcaagaacgtgctcgccatgcataatcttcttcgatgaggtggat
gctttgacaacaatgcgtggaaaagaaggggggtgggttgttgagaggctcttaaatcag
ttgcttatagagttagatggtgcagatcagcgccctggtatttttatcattggtgccact
aacagacctgaggtgatggaccctgctgtcctgcggcctggtaggtttggcaaacttctt
tatgtccctctgccaagttcagaggaccgtggattgatcttaaaggctctcgctaaagga
aaacctattgatcctagtgtcgacttggctgccatcggtcaaatggaggcttgtaaaaat
cttagcggggctgatcttaggaagctgatggaggaagccgcaatgactgctttgaaggag
gccaagagacaaagatgtttgaatgagacttcaggtacaatcacggccgcacaaaatgag
ccagcagttaatatcacagccactcattttgagcaagcccttggtaaaatttcaccatcc
gtgtcagagaagcaaatacaatattacaaagcttggtcagagagtttcaaagcaacatga
DBGET
integrated database retrieval system
