KEGG   Populus trichocarpa (black cottonwood): 7464784
Entry
7464784           CDS       T01077                                 
Name
(RefSeq) ras-related protein Rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04144  Endocytosis
pop04145  Phagosome
pop04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    7464784
   04145 Phagosome
    7464784
   04148 Efferocytosis
    7464784
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7464784
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7464784
   04031 GTP-binding proteins [BR:pop04031]
    7464784
Membrane trafficking [BR:pop04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    7464784
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   7464784
  Exosomal proteins of other body fluids (saliva and urine)
   7464784
  Exosomal proteins of colorectal cancer cells
   7464784
  Exosomal proteins of bladder cancer cells
   7464784
GTP-binding proteins [BR:pop04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    7464784
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU cobW ATP_bind_1 Septin AAA_16 RsgA_GTPase nSTAND3 AAA_22 AAA_7 PduV-EutP AAA_24 G-alpha Lyx_isomer nSTAND1 IIGP NACHT ABC_tran DAP3
Other DBs
NCBI-GeneID: 7464784
NCBI-ProteinID: XP_002307527
UniProt: A9PGF2
LinkDB
Position
5:complement(20493548..20499202)
AA seq 205 aa
MSARRRTLLKVIVLGDSGAGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ
IWDTAGQERFQSLGVAFYRGADCCALVYDVNVMRSFDTLDNWHEEFLKQANPSDPKTFPF
ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNILYFETSAKEDYNVDPAFLSIAKTALAHE
HGQDIYFQGIPEDVTENEQRGGCAC
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtcagcgcgtaggcgtaccttgctcaaggtcatcgttctcggggacagcggggctggc
aagacgtcgttaatgaatcaatatgtgcacaagaaatttagtcagcaatataaggctaca
attggtgccgatttcgttaccaaagaactccagattgatgacaggcttgtcactctgcaa
atatgggacacggctgggcaagaaagatttcagtcacttggagttgcattttatagagga
gcagattgctgcgctctagtttatgatgtgaatgtcatgagatcattcgatactcttgac
aactggcacgaagagttccttaaacaggcaaatccatctgatcccaagacatttccgttt
atattgcttggaaacaagatagatattgatggtggaaatagccgagtggtttctgagaag
aaagctaaggactggtgtgcgtcgaaaggaaacatactttactttgagacgtcagcaaag
gaggattacaatgttgatcctgcattcttatccattgcaaaaactgctctagcccatgag
catggacaggacatatacttccagggtatcccagaggatgtcacagagaatgagcaaaga
ggtggctgtgcatgttaa

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