Populus trichocarpa (black cottonwood): 7464855
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Entry
7464855 CDS
T01077
Name
(RefSeq) cyclin-T1-5 isoform X1
KO
K15188
cyclin T
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
7464855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7464855
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
7464855
Brd4/P-TEFb complex
7464855
7SK RNP complex
7464855
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cyclin_N
CycT2-like_C
Cyclin_C
RE_TaqI
TFIIB
Motif
Other DBs
NCBI-GeneID:
7464855
NCBI-ProteinID:
XP_002299415
UniProt:
B9GK51
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All DBs
Position
1:complement(6471783..6478708)
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AA seq
592 aa
AA seq
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MAGALPGESSHCGNSESGPSRSSQDRPEEGGRWYFSRKEIEENSPSRRDNIDLKKETYLR
KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHAKNDRRTIATVCMFLAGKVEETP
RPLKDVILVSYEIMHKKDPAATQRIKQKEVYEQQKELILLGERVVLATLGFDLNVHHPYK
PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKTHHIAAGAIFLAAKFLKVKLPSD
GEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPPSQGSEVEGSAGGGSGHRLPAKTPAVS
EDHVSKQTSSQAASEPLCQDDNVALPRNAHNQNNDNGSGETDSVITDHKVEVETRDREHV
SHKEITREDPNKSRYGAEQLGEEDQERTAGRNDGADAGEWRDDAVSHKSTSLGGRNLDLR
EGIVDQSPKDAIKMIDKDKLKAALEKRKKSRGETMRKKDIMDEDDLIERELEDGVELAAE
DEKIKQERRQSWSKTENPDDINDHAEIGDGHVIMKGQSTRGLEAEYAEEGEMLDDASPIL
NDRKRKGSPAERQSDGKRRHDYNRDTIEDGHKMGKSGYAEREHRRHPQDNHL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcattacctggggaatcttcacattgtgggaattccgagagtgggccatct
aggagttctcaagacaggccagaggaagggggtcgttggtatttttctaggaaagaaata
gaagagaattccccatcaagaagagataatattgacttgaaaaaagagacgtatctacgg
aaatcgtattgcacgtttttgcaggatctcggcatgagattgaaagtgccccaggtaacc
atagctacagcaataatattctgtcatagattcttcattcgccaatcacatgcaaagaat
gacagaaggaccatagcaactgtgtgtatgttccttgctgggaaagtggaagagactcct
cgaccactaaaggatgttattctggtttcatacgagataatgcacaaaaaagatcctgct
gctacccagaggatcaaacaaaaggaagtatatgagcaacagaaagagcttattttactt
ggggagagggttgtacttgccactttgggttttgacctcaatgttcatcacccctacaaa
ccactagttgaagcaataaagaaatttaaggttgcacaaaatgcccttgctcaagttgcg
tggaattttgttaatgacgggctgaggacttcactctgcctgcaatttaaaacccatcac
attgcagcaggtgccattttccttgctgccaagttcctcaaagtgaagcttccatcggat
ggcgagaaagtctggtggcaagaatttgatgtcaccccgcgccaattggaggaggttagc
aatcagatgttggagttatatgagcaaaacagagtgcccccatcacaggggagtgaagta
gaaggaagtgctggaggtgggtcagggcatcgactgccagctaaaactccagctgtgagt
gaggaccatgtttcaaagcaaacatcgtcacaagcagcctctgaacctctatgtcaagat
gacaatgtggcactgccaagaaacgcccataatcaaaataatgacaatgggagtggagag
actgacagtgttattactgatcacaaagtggaggtcgaaactagagaccgtgagcatgtc
tcccacaaggaaatcacaagagaggaccccaataaatccaggtatggggcagagcaacta
ggtgaagaagaccaagaaagaactgcagggagaaatgatggcgcagatgctggagagtgg
agggatgatgctgtatctcataagtccaccagcttgggtggtagaaacttggatcttcga
gaaggcatagttgaccagtcccctaaagatgctattaagatgatagacaaggacaagctg
aaggcagcacttgagaaaaggaagaaatctcgaggggagacaatgcggaaaaaggatatc
atggatgaggatgatcttattgagagggaactagaagatggggttgagttggcagctgag
gatgagaaaatcaaacaagagagaaggcagagctggtctaaaactgaaaatccagatgat
attaacgatcatgcagaaattggggatggccatgtgatcatgaaaggacagtcaacacgt
ggattggaagcagaatacgcagaagaaggggaaatgttagatgatgcttcccccatactg
aatgaccggaaaagaaaagggagcccggctgaaaggcagtcagatggaaagaggaggcat
gattacaaccgtgataccatagaagatggacacaagatggggaagagtggttatgcggaa
agggagcacagaaggcatccacaagacaatcatttgtga
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