Populus trichocarpa (black cottonwood): 7465017
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Entry
7465017 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7465017
KO
K13124
mitogen-activated protein kinase organizer 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7465017
Spliceosome [BR:
pop03041
]
Complex C
Other components
Complex C specific factors
7465017
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_RFWD3
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_Vps41
WD40_like
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
WD40_CFAP43
VID27
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Beta-prop_NOL10_N
PQQ_2
Motif
Other DBs
NCBI-GeneID:
7465017
NCBI-ProteinID:
XP_002298725
UniProt:
B9GH94
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Position
1:complement(31646508..31649140)
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AA seq
300 aa
AA seq
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MSDVSELPNKEANVLKGHEGGVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKSH
GREVRDVHVTQDNSKLVSCGGDRQVFYWDVATGRVIRKFRGHGSEVNAVKFNEYASVVVS
AGYDQSLRAWDCRSHSTEPIQIIDTFSDSVMSVCLTKTEIIAGSVDGTVRTFDIRIGREI
SDNLGHPVNCISMSNDGNCILASCLDSTLRLLDRTTGELLQEYKGHICKSYKLDCCLTNT
DAHVAGGSEDGYIYFWDLVDASVLSRFRAHSSVVTSVSYHPTDNCMVSASVDGTIKVWKT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtctcggaactgccaaataaggaggcaaacgtgctgaaaggtcacgaagga
ggagtcttagccgcaagattcaacggtgacggaaattattgcctgagttgcggcaaagac
cgcaccattcgtctttggaatcctcaccgcggaatccacattaagacctacaaatctcac
ggtcgtgaagttcgcgatgttcacgtcacccaggataattcgaaattagtttcttgtgga
ggagaccgacaagtgttttactgggatgtggctactggtcgtgtaattcggaaattccga
ggacatggtagtgaggtgaatgctgtgaaatttaatgagtatgcatctgttgtggtatca
gcaggttatgatcaatcattgcgtgcttgggattgtagatctcatagtactgagccaatt
cagatcattgacacgttttcagatagtgtgatgtctgtgtgtttgacgaaaactgaaatc
attgctggaagtgttgatggtactgttagaacattcgacattcgtattgggagagaaata
tctgataacttggggcatcctgtcaactgtatctcgatgtcaaatgatggtaactgcata
ttagcgagttgcttggattctactttgcgcctattggacagaactacaggcgagcttttg
caagaatataaaggacatatatgcaagtcatacaagttggattgctgcctcaccaacact
gacgcccatgtagctggtggctcagaggatggctacatttacttctgggatcttgtggat
gcgtctgtgttgtcacgtttccgagctcattcctcagtggtaacaagtgtgagttaccat
ccaactgacaactgcatggtaagcgcctctgtagatggcacaattaaggtttggaaaaca
tga
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