Populus trichocarpa (black cottonwood): 7465052
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Entry
7465052 CDS
T01077
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7465052
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
7465052
NCBI-ProteinID:
XP_002300248
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Position
1:30932410..30934818
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AA seq
596 aa
AA seq
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MAVDNALSSPLGPPACEKDAKALQFIEEMTRKTDSVQEDVLAKILIQNAEVEYLKRFNLD
GATDRETFKSKLPTIRYEDLQPEIQRIANGDRSSILSTHPISEFLTSSGTSAGERKLMPT
IKEELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETRTPGGLLARPVLTSYYKSD
HFKTRPYDPYNVYTSPNEAILCADSFQSMYTQMLCGLLEREQVLRVGAVFASGLLRAIRF
LQLHWRELADDIESGMLNKEITDPSVKDCMVKILKPNPKLAEFVRMECSKENWEGIITRI
WPNTKYLDVIVTGAMAQYIPTLDYYSGGLPLACTMYASSECYFGLNLNPMCKPSEVCYTI
MPNMAYFEFLPHDPNGFTHDSTPKLVDLADVELGKEYELVITTYAGLYRYQVGDILRVTG
FHNSAPQFHFVRRKNVLLSIDSDKTDEAELQKAVENASQLLREFNTSVVEYTSYADTKTI
PGHYVIYWELLVKDSANSPSDEVLNQCCLAMEECLNSVYRQGRVADYSIGPLEIRVVKNG
TFEELMDYAISRGASINQYKVPRCVNFTPIMELLDSRVVSKHFSPALPYWTPERRR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgataatgctctttcatcacctttgggtcctccagcgtgtgagaaagatgct
aaagctcttcaattcattgaggaaatgactagaaagactgactcagttcaagaggatgtt
ttggccaaaatcctgatccaaaacgctgaggtcgagtacttaaaacggttcaaccttgat
ggtgcaactgaccgtgagacttttaagtctaaattacccacgatcagatacgaggatctt
cagcctgaaatccaacgaattgctaatggtgatcgctcttccatcttatcaactcacccc
atctcagaattccttactagttctgggacatctgctggcgaaagaaagctcatgccaaca
attaaggaagagctggatcgtcgccaattactgtatagtttactcatgccagtaatgaac
ctttacgtgcctggcttagacaaaggcaaaggcttatacttcttgttcgtgaagtctgaa
acaagaaccccaggaggtctcctggctcgtccggtgcttacgagctattacaagagtgac
cacttcaagacacgtccatatgatccttacaatgtgtacaccagcccaaatgaggccatt
ctttgtgcagattcattccagagcatgtacactcagatgctctgtggccttctagagcgt
gaacaagtgctcagggtcggtgcagtctttgcttccggccttctccgtgccataaggttt
ctccaacttcattggcgggaacttgctgatgatatcgagtcaggaatgctaaacaaggaa
ataactgacccttccgtcaaagattgcatggtaaagattctgaagccaaacccaaagctt
gcagagtttgtcagaatggagtgtagtaaggaaaactgggaagggatcattacaagaatt
tggcctaacaccaaatatcttgatgtgattgtcactggagccatggcccaatatatccct
accctcgactactatagtggtggtttacctttggcgtgcactatgtatgcctcatcagaa
tgttactttgggttaaacctgaatccaatgtgcaagccatcagaagtttgttacacaatc
atgccaaatatggcttacttcgagtttttaccccacgatcctaatgggttcactcatgat
tcaactccaaaacttgttgaccttgctgatgttgagttgggtaaggaatacgagcttgtt
atcacaacctatgccggtttatacaggtaccaagttggtgacatccttcgagttaccggg
ttccacaactcagcccctcaatttcatttcgtaaggaggaagaatgtattgcttagtatt
gactcggacaaaacagatgaagctgagttacaaaaggcagttgagaacgcatcacaactt
ctacgtgaattcaacacaagtgttgttgaatacactagctatgctgatacaaagacaatt
cctggccactatgtgatttactgggaattattggtcaaagactcagccaactctcctagt
gacgaagtactaaaccaatgttgccttgctatggaagaatgtttgaactcagtgtatcga
caaggccgagttgcagattactcaattggaccactcgagatacgtgtggtaaaaaatggt
acatttgaggagctgatggattatgcaatttcaagaggggcatccatcaatcagtataag
gttccaaggtgcgtcaattttactccaatcatggagttgcttgattcaagggtggtatcc
aagcatttcagcccagctttgccatactggacaccggaaagaagaaggtga
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