Populus trichocarpa (black cottonwood): 7465105
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Entry
7465105 CDS
T01077
Name
(RefSeq) scarecrow-like protein 14
KO
K27753
GRAS family protein LISCL
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7465105
Transcription factors [BR:
pop03000
]
Eukaryotic type
Other transcription factors
GRAS
7465105
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Gene cluster
GFIT
Motif
Pfam:
GRAS
DUF2642
Motif
Other DBs
NCBI-GeneID:
7465105
NCBI-ProteinID:
XP_002299867
UniProt:
B9GJM1
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Position
1:25921337..25924832
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AA seq
757 aa
AA seq
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MGSDSRFTEFPGSNKFEDEIVFPDSNQYHNVSNGFKFEDLDFDCVENPLVLPDPDPGALS
SITAIDEDSPSDDNDSENLLKYINQMLMEEDMEEKPCMFHDPLALQAAERSLYDILGEKN
QPSLPHDSPSYGDQFLVDSPDDVFWSSRSDYSSNKSSFSNSVSSVDPQGNGEFGEFKPLF
MQTPLPNNFVFHSAANFSSESSFKLHNGLASNGDSATKPSAGNIVAPNLFSDSDLALQFK
RGVEEASKFLPKGNPLIIDLETSALAPEMNRDAPEVAVKAEKEDREFFPEWLTGKKNHER
EDEDFEEERSNKQSAVHVDESELSEMFDMLVGVGEGCRPPGCILDQAEQCESSKTVRQNG
QTKGSSGSKTRAKIQGNNKEVVDLRTLLVLCAQAVSSNDRRAANELLKQIRQHSSPLGDG
SQRLANCFANGLEARLAGTGTQIYTALSTEKWSAVDMLKAYQAYVSACPFKKMAIIFANH
NIMKVAEKASTLHIIDFGILYGFQWPPLIYRLSRRPGGPPILRITGIELPQSGFRPAERV
QETGRRLVKYCERYNVPFEYNPIAQKWDTIQIDDLKINHDEVLAVNCLFRFKNLLDETVV
VNSPRNAVLNLISKTKPDIFIHAIVNGSYNAPFFVTRFRETLFHFSALFDMLDSNMPRED
EMRLKFEKEFYGREVMNVIACEGSERVERPETYKQWQVRNMRAGLKQLPLDPHVIKYLKC
KVKVRYHEDFEVDGDGHWMRQGWKGRTIIASSAWIPA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgggttcggattctcgtttcactgagttccctggttctaataaatttgaggatgagatc
gtgtttccggattcaaatcagtatcacaatgtttctaatggattcaagttcgaagattta
gacttcgactgtgtagaaaatccacttgttttgcctgacccagatccgggtgctttgtcg
tcgatcacagccatcgatgaagattctccttctgatgataatgactcggagaatctcctc
aagtacataaaccagatgcttatggaagaggacatggaagagaagccctgtatgtttcat
gacccgttggcacttcaagctgctgagagatcgctttatgatattcttggtgagaagaac
cagccatccttaccccatgactctccttcgtatggtgaccagtttttggttgatagcccg
gatgatgttttttggagtagccgcagtgattatagcagcaataaaagttccttttctaat
tctgtcagctcggtagatcctcaagggaatggtgaatttggggaattcaaaccgttgttt
atgcaaacgcctcttcctaataattttgtttttcattctgctgcaaatttcagttcagaa
tcatcattcaaattacacaatgggttagcaagtaatggcgatagtgccacgaagccctct
gcgggtaacattgtggcaccaaatttgttcagtgacagtgatttggcgttacagttcaag
agaggtgtagaggaagctagtaagttccttcctaagggcaatccactgattattgatttg
gagaccagtgcactggctccagagatgaatagagatgccccggaggtggcggtgaaggcc
gagaaggaagacagggagtttttccccgaatggttgacgggaaagaagaatcatgagcgg
gaggatgaggattttgaggaagaaagaagtaacaagcagtctgcagttcatgtagatgag
agcgaactgtcagagatgtttgatatgttagtaggagttggggaaggatgccgacctcct
gggtgtatacttgatcaggctgaacagtgtgaatcaagcaagacagtgcggcagaatggg
caaacaaagggatccagtggtagcaagactcgggctaagatacaaggaaataacaaggaa
gttgttgatttgaggactcttctagttctatgtgcacaagcagtctcctcaaatgatcgc
agagccgctaatgaactactgaagcagatcaggcagcactcttcacctctcggtgatggg
tctcagaggctggctaattgttttgctaatggcctcgaagcacgtttggctggaactggt
acccagatatatacggcactgtctactgaaaaatggtcggctgtggatatgttgaaagct
tatcaagcttatgtttcagcttgcccattcaagaagatggcaatcatctttgcaaaccat
aacataatgaaagtagccgagaaggcatcgacacttcatataatagattttggtatattg
tatggtttccagtggcctcccctcatttatcgcctctcaaggagaccaggtgggcctccc
atactgcgcattacaggaatagagcttccccaaagtggtttccggccagcagagagagtt
caagagacaggtcgtcgcttggtaaagtactgtgagcgctataatgttccatttgagtac
aaccccatagctcagaaatgggataccatccaaattgatgacctgaagatcaatcacgat
gaagttctcgctgtaaattgtctctttagatttaaaaatctgcttgatgaaacagttgta
gttaacagtccccggaatgctgttctgaacttaatcagtaagacaaaaccagatatattt
atccatgctattgtcaatggatcgtacaatgctcctttttttgtcacaaggttcagggag
acactgttccatttctctgcattgtttgatatgttggatagtaatatgccccgtgaagat
gagatgaggttgaagtttgaaaaagagttctatggtcgggaggtaatgaatgtcatagca
tgtgagggctctgagagggttgaaagacctgagacttacaagcaatggcaggttcggaac
atgagagctgggctgaagcaacttcccttggaccctcatgtcataaaatatctgaagtgt
aaggtgaaggttaggtaccatgaagattttgaggtcgatggagatggccactggatgcga
cagggatggaaaggacggactatcattgcatcctctgcctggattcctgcatag
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integrated database retrieval system
