Populus trichocarpa (black cottonwood): 7465108
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Entry
7465108 CDS
T01077
Name
(RefSeq) RHOMBOID-like protein 1 isoform X1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7465108
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
7465108
Peptidases and inhibitors [BR:
pop01002
]
Serine peptidases
Family S54: Rhomboid family
7465108
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GFIT
Motif
Pfam:
Rhomboid
DER1
Motif
Other DBs
NCBI-GeneID:
7465108
NCBI-ProteinID:
XP_002298351
UniProt:
B9GJM5
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Position
1:complement(25874484..25878847)
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AA seq
374 aa
AA seq
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MMGREGAGNDIVEIKVHPRRENNVGSPPPYQNKAVFKKWVPWLVPLFVVSNIAVFIAVMY
VNDCPTNSGSCVAPSLGRFSFQPLKENPLLGPSSSTLVKMGALDVARVVNKHQSWRLISC
IWLHAGVFHVVANMLSLLLIGIRLEQEFGFFRIGLVYVISGFGGSLLSALFIQTGISVGA
SGALFGLLGGMLSELITNWTIYANKSAALTTLLCIIAINLAVGLLPHVDNYAHIGGFLSG
FFLGFVFLIRPQFKWINQKACPPGYIAPPAKSKHKAYQYVLWVVSLIVIIIGFTLGMVAL
LRGVNVNDHCSWCHYLSCVPTSLWSCNSRQVYCQSSQLGNQLNLTCLSNGKSNLYYLSAD
DLSKVQQLCAQLCS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgatggggagggagggcgcagggaacgacattgtggagattaaggtacatccaaggcgg
gaaaacaatgtaggctcaccaccaccgtaccagaacaaagctgttttcaagaaatgggtg
ccatggcttgtccccttatttgtggtttctaacattgctgtctttattgctgtcatgtat
gtcaatgattgccccaccaattctggctcttgtgttgctccttctttgggcagattctcc
tttcagcctctcaaagaaaatccccttcttggcccctcctcttcaactttggtgaagatg
ggagctcttgacgtggctagagtggtgaataagcaccagagttggcgtctcatttcttgc
atatggctacatgctggagtcttccatgtggttgccaacatgttgagtctcctcctaatt
ggaattcgtcttgagcaagaatttgggttctttcgaattgggttggtctatgtcatttct
ggctttggtgggagtttgttgtcggctttgtttattcagacaggtatatctgttggtgcc
tccggtgcactgtttggtttactaggaggcatgctttcagagctgattacgaactggacc
atatacgcaaataagtcagcagcactgacaactctcctttgcatcattgcaataaatcta
gcggttggactcctcccacatgtggacaactatgctcatattggaggatttctctctggc
ttttttctgggctttgtgttcttaattcgcccccagtttaagtggatcaaccaaaaagca
tgtcctccaggatacattgcacccccagctaaatctaaacacaaggcgtaccaatatgta
ctgtgggttgtatctctgatagtaatcatcattggatttactcttgggatggttgcactc
cttcgaggagttaatgtgaatgatcattgttcatggtgtcattacttgagctgcgttcct
acttcattatggagctgcaattctcggcaagtttattgtcagtcgtctcaacttggaaat
caactgaacttgacgtgcttgagcaatgggaaaagcaacctgtattatttgtctgctgac
gacctgtccaaggttcagcagttgtgcgctcagctttgcagttga
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