KEGG   Populus trichocarpa (black cottonwood): 7465129
Entry
7465129           CDS       T01077                                 
Name
(RefSeq) ras-related protein RABE1c
  KO
K07901  Ras-related protein Rab-8A
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    7465129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7465129
   03036 Chromosome and associated proteins [BR:pop03036]
    7465129
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7465129
   04031 GTP-binding proteins [BR:pop04031]
    7465129
Membrane trafficking [BR:pop04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    7465129
 Autophagy
  Other autophagy associated proteins
    7465129
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    7465129
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   7465129
  Exosomal proteins of other body fluids (saliva and urine)
   7465129
  Exosomal proteins of colorectal cancer cells
   7465129
GTP-binding proteins [BR:pop04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    7465129
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_29 C2c1_Nuc-II MCM PduV-EutP AAA_22 AAA_16
Other DBs
NCBI-GeneID: 7465129
NCBI-ProteinID: XP_002298373
UniProt: B9GER9
LinkDB
Position
1:complement(25444312..25447301)
AA seq 216 aa
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR
LADTDTRAEPTTLKITPTDQAGGGGQAAQKSSCCGS
NT seq 651 nt   +upstreamnt  +downstreamnt
atggctgctcctcccgctagagctcgagccgattatgattatctcattaagcttctcttg
attggcgatagcggtgtgggcaagagttgccttcttttgcgtttctctgatggttccttc
actactagttttatcaccaccattggtattgactttaagataagaaccattgagcttgat
ggcaaaaggattaagcttcaaatttgggatacagctggtcaggagcggtttcgaacaatc
acaactgcttactatcgcggagctatgggtattttgctggtgtatgatgtcaccgatgaa
tcatctttcaacaacattaggaattggattcgcaacatcgagcaacatgcttctgataat
gttaacaagatattggtagggaacaaggctgacatggatgaaagcaaacgggctgtgcca
acatccaagggccaagcacttgctgatgaatatgggatcaaattctttgaaactagtgca
aagacaaatctaaacgtggagcaagttttcttttcaatagcaagggatataaagcaaagg
cttgctgacaccgacacaagggctgagcctactacgttgaagatcactccaacagaccag
gcaggcggaggtggtcaagctgcccagaaatcttcttgctgtggttcttaa

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