Populus trichocarpa (black cottonwood): 7465134
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Entry
7465134 CDS
T01077
Name
(RefSeq) monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00740
Riboflavin metabolism
pop00790
Folate biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01240
Biosynthesis of cofactors
Module
pop_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
7465134
00790 Folate biosynthesis
7465134
Enzymes [BR:
pop01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
7465134
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
7465134
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Motif
Pfam:
GTP_cyclohydro2
DHBP_synthase
Motif
Other DBs
NCBI-GeneID:
7465134
NCBI-ProteinID:
XP_002299894
UniProt:
B9GES8
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Position
1:25352459..25355337
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AA seq
534 aa
AA seq
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MDCASLYTDLLFPHMVTSSSFRRLLETPRGIGIGADLFKHRLLSPTCWAIGGGSASDESF
LKRSENGSLLGAFDESASAPFLTLDAEITPETIDFFVSDAEGDPDCPTEGYSSIEQALNT
LREGKFVIVVDDENGDIEGNLIMAASLTSPQHVSFLIKNGSGIVSVGMKEEDLERLKLPL
MSPETENEDSSAPTFTITVDAKSGTCTGVSASDRAKTVLALSSPETKPEDFRRPGHVFPL
KYRNGGVLRRAGHTEASVDLVMLAGLPPVSVLSAIIDPEDGSIASLADIRKLAMEHNIPI
VSITDLIRYRRKREYLVERSAISRLPTKWGLFEAYCYRSKLEGTEHVAIVKGNIGDGQDV
LVRVHSECLTGDIFGSARCDCGNQLDLAMQLIEQAGRGIVVYLRGHEGRGIGLGHKLRAY
NLQDQGHDTVQANIELGLAVDAREYGIGAQILRDIGVRTMRLMTNNPAKFTGLKGYGLAV
IGRVPVFTPITEENKRYLETKRTKMGHVYGSDIRGPLAGFINPTESSTGSPEEE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggactgtgccagcttatacactgacctcttgtttccccacatggtcacgagttcaagc
tttcggagacttttagagactcctcgtggtataggaataggagcagacctgttcaaacac
aggctgttgagtcccacatgttgggctattgggggtggaagtgcgtctgatgagagtttt
ttgaagcgtagtgaaaatgggtctctgttgggagcttttgatgagtctgcttcagcacca
tttctgacacttgatgctgaaattactcctgaaaccattgatttcttcgtcagtgatgca
gagggcgatcctgactgcccaaccgaagggtactcttcaattgagcaggcactcaatact
ttacgtgagggaaagtttgtaattgttgtagacgatgaaaatggggatattgaaggaaac
cttatcatggcagcatctcttacaagtcctcagcatgtgtcatttctgattaagaatgga
tcaggaattgtttcggtaggcatgaaagaggaggatcttgaaagacttaagcttcctctg
atgtcaccagagacagagaacgaagattcatctgcccccactttcacaatcactgtggat
gcaaaatctggaacatgtactggagtatcagcatcagacagggctaagactgttcttgct
ctttcttctcctgagaccaagcctgaagattttagaaggccaggccatgtgtttccactc
aagtatcgcaacggtggggttttaagaagagctggtcatacagaggcttctgtagatttg
gtgatgttggctggattgccaccagtttctgttctttcagcaattattgatccagaagac
ggttctatagcctctttggctgatataagaaagttggcaatggagcacaacataccaatc
gtatcaataactgatttaataaggtaccggaggaagagagaatatctagtagagaggagt
gctatttctcgtctacctaccaaatggggtctatttgaagcttactgctaccgctcaaag
ctagaaggtacagaacacgtagctatagtcaagggaaatattggagatggacaggatgtt
ttagtaagagttcattcagaatgtttgacaggggatatatttggatcagctcgttgtgac
tgtggcaatcagttggatttggcaatgcagttaattgagcaagctggtagagggatcgtt
gtttatcttcgaggccatgaaggaagaggaatcggccttggtcacaaacttcgagcctac
aatttgcaggatcaaggccatgacacggtccaggctaacattgaacttggattagctgtt
gatgcacgcgagtatggcattggcgctcagattctaagagacataggggtccgaacgatg
cgcctgatgaccaacaaccccgccaagttcactggtttgaagggatatggcttggctgtt
atcggtagggttcctgtcttcacacccattacagaggaaaataagaggtacttggaaacc
aagcgtacaaagatgggtcatgtttatggctctgatatacgaggacccttggctggattc
atcaacccaactgaaagtagcacaggctcaccggaggaagagtga
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