Populus trichocarpa (black cottonwood): 7465253
Help
Entry
7465253 CDS
T01077
Name
(RefSeq) probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY
KO
K09667
protein O-GlcNAc transferase [EC:
2.4.1.255
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00514
Other types of O-glycan biosynthesis
pop03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
7465253
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
7465253
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7465253
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7465253
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.255 protein O-GlcNAc transferase
7465253
Glycosyltransferases [BR:
pop01003
]
O-Glycan biosynthesis
O-linked GlcNAc type
7465253
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
7465253
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
7465253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
Glyco_transf_41
TPR_8
TPR_11
TPR_12
TPR_17
TPR_7
TPR_16
TPR_19
TPR_10
TPR_14
TPR_9
EST1_DNA_bind
TPR_6
TPR_Slam
NatA_aux_su
TPR_CcmH_CycH
ARM_TT21_C
TPR_15
ARM_TT21_2nd
TPR-S
Cohesin_load
Wzy_C_2
DUF5008
Motif
Other DBs
NCBI-GeneID:
7465253
NCBI-ProteinID:
XP_024443476
LinkDB
All DBs
Position
16:complement(5670643..5682020)
Genome browser
AA seq
913 aa
AA seq
DB search
MAWTENDAGSVREKELIEDNGFLKGSQPSTGTSGSPVVSSPVQKGFEGKDALSYANILRS
RNKFADALALYESVLEKDSGIVEAYIGKGICLQMQNMGRLAFDSFAEAIKLDPQNACALT
HCGILYKDEGRLLEAAESYHKALKADLSYKPASECLAIVLTDLGTSLKLSGNTQEGIQKY
YEALKVDPHYAPAYYNLGVVYSEMMQYDTALSCYEKAAMERPMYAEAYCNMGVIYKNRGD
LESAIACYERCLAVSPNFEIAKNNMAIALTDFGTKVKLEGDISQGVAYYKKALYYNWHYA
DAMYNLGVAYGEMLKFEMAIVFYELAFNFNPHCAEACNNLGVIYKDRDNLDKAVECYQLA
LSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIMANPTYAEAYNNLGVLYRDAGNISM
AISAYEQCLEIDPDSRNAGQNRLLAMNYINEGHDDKLFEAHRDWGRRFMRLYPQYTSWDN
PKVPDRPLVIGYVSPDYFTHSVSYFIEAPLVYHVYANYKVVVYSAVVKPDAKTNRFKEKV
LKRGGIWRDIYGIDEKKVAIMVREDKVDILVELTGHTANNKLGMMACRPAPVQVTWIGYP
NTTGLPTIDYRITDSFADPPDTKQKHVEELIRLPECFLCYIPSPEAGPVAPTPALSNGFI
TFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRQRFLTMLEQLGLEPLH
VDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGAVHAHNVGAS
LLSNVGLGHLVAKNEEEYVQSALQLASDIAALSNLRMSLRDLMSKSPVCDGPNFTLGLET
TYRNMWHRYCKGDVPSLRRIELLQQQEVPKEVPIKNTDSTRITSSRDGPPESIKANGFSA
VLLPKVDHTINLG
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggacagagaatgatgctggtagtgtgagagagaaggaattgattgaagataat
ggtttcttgaaaggatcacagccttcaactggcactagtggctctcctgttgtttcatct
ccagtgcagaaggggtttgaagggaaggatgcactctcttatgccaatattcttcggtcc
agaaataaatttgcagatgctcttgctctttacgagagtgtcctggagaaagatagtgga
attgttgaggcttatattggaaaaggaatatgcttgcagatgcagaacatgggaaggctt
gcttttgatagttttgctgaagctatcaagctggacccacagaatgcatgtgccctgaca
cattgcggtatattgtacaaagatgagggtcgtctgttagaggctgctgagtcgtaccac
aaggctctgaaagctgatctttcatacaagccagcttcggagtgcctagccattgtttta
acagatcttggaaccagcttaaagctctctggtaatacacaagagggaattcaaaagtat
tatgaagctcttaaagtagatccacactatgcgcctgcatattataaccttggtgttgta
tactctgaaatgatgcaatatgacactgcccttagttgctatgagaaggctgcaatggag
aggcccatgtatgctgaagcatattgcaacatgggtgtcatctataaaaacagaggtgac
ttagaatcagccattgcctgttatgagaggtgtctagccgtgtcaccaaactttgagatt
gcaaagaataatatggcaatagcattgacagatttcggaacaaaagttaaactggaggga
gatatcagccaaggtgtggcatattacaaaaaggctttgtattataactggcactatgct
gatgctatgtataatctcggtgttgcttatggcgaaatgctgaagtttgagatggcaatt
gtgttctatgaacttgctttcaacttcaatcctcattgtgctgaggcatgcaacaactta
ggtgtaatatacaaagaccgagacaaccttgataaagccgtggagtgttatcagttagct
ttatcaatcaaaccaaacttctcacaatcattgaacaaccttggtgttgtctacacagtc
cagggtaaaatggatgctgctgcaagcatgattgagaaagctatcatggcaaatcccaca
tatgctgaagcatataataacttaggagttctttatagagatgctggcaatatatctatg
gccattagtgcttatgagcaatgcctggagatagatcctgattctcgcaatgcaggccag
aatcggttgcttgcaatgaactacataaatgagggacatgatgataagctttttgaggct
catagggactggggtaggcgctttatgagattgtatccacagtacacttcatgggacaac
ccaaaagttccagatagacctcttgtgattggatatgtgtctccggattattttactcat
tctgtatcttattttattgaggcccctcttgtctatcatgtctatgcaaattacaaggtg
gttgtttattcagcagttgtgaagcctgatgcaaaaacgaataggtttaaggagaaagtc
ttaaaaaggggtgggatatggagggatatatacgggattgatgagaagaaggttgcaatc
atggtcagagaagataaagttgacatattggtagaactcactggacatacagctaacaat
aagttgggaatgatggcatgccggccagcacctgttcaggtgacttggattggctaccca
aatacaactggcttgcctaccattgattacagaattactgattcattcgctgaccctcct
gatactaaacaaaagcatgttgaggagttgattcgactaccagaatgcttcctttgttat
ataccttcaccagaggctgggcctgttgctccaactcctgctctttcgaatggcttcatc
acatttggtagctttaataatttggcaaagataacacctaaggtattgcaagtttgggct
aggatactctgtgcagttccaaactcccgccttgtcgtgaaatgcaagccattttgctgc
gatagtgttcgacaaagattccttacaatgttggagcagctggggttggaaccactgcat
gttgatcttctgcctctaattcttcttaaccatgatcacatgcaagcttattctctaatg
gacattagcttggatacttttccatatgctggaacaacaacaacatgtgaatctttgtac
atgggagttccatgtgttaccatggctggtgctgtacatgctcacaatgttggcgcgagt
cttctcagcaatgtcgggttaggacatctggttgcaaaaaatgaagaggaatatgttcaa
tcggcactgcagctggcttcagacattgcggctctctcgaacttgaggatgagtctccgg
gaccttatgtctaaatctcctgtttgtgatggaccaaattttactcttggtttagagaca
acataccggaacatgtggcacagatactgtaagggtgatgtgccatctttaaggcggata
gaattgctacaacagcaggaggttcccaaggaggtacctatcaagaacactgattcaaca
aggattacatcctcaagagatggccctccagaatccatcaaagctaatggatttagtgca
gtcttactgcccaaggtcgatcatactataaacttaggctag
DBGET
integrated database retrieval system
