Populus trichocarpa (black cottonwood): 7465290
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Entry
7465290 CDS
T01077
Name
(RefSeq) 60S ribosomal protein L4
KO
K02930
large subunit ribosomal protein L4e
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
7465290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pop03011
]
7465290
Ribosome [BR:
pop03011
]
Ribosomal proteins
Eukaryotes
Large subunit
7465290
Archaea
7465290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L4
Ribos_L4_asso_C
Motif
Other DBs
NCBI-GeneID:
7465290
NCBI-ProteinID:
XP_002322848
UniProt:
B9IIY9
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All DBs
Position
16:6560747..6562730
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AA seq
407 aa
AA seq
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MAAAARPLVSVQTLPCLNDMVTDSAATVALPDVMKASIRPDIVNYVHSNISKNSRQPYAV
SKKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAYGNMCRGGRMFAPTKIWRRWHRK
INVNQKRYAVVSAIAASAIPSLVMARGHRVESVPEMPLIISDSAESIEKTSTAIKVLKEI
GAFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKMVKAFRNIPGVEVANVE
RLNLLKLAPGGHLGRFVIWTKSAIEKLDSIYGSFEKCSEKKKGYVLPRSKMVNADLARII
NSDEVQSVVKPIKREVKRATLKKNPLKNLNVLLKLNPYAKTARRMALLAEAERVKSKKEK
LDRKRKPVSKEELAAAKAAGKAWYKTMISDSDYTEFENFTKWLGVSQ
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgcacgccccctggtctctgttcaaaccctcccctgcctcaacgacatg
gtcacggattcggctgccaccgtggctctccccgatgtcatgaaggcctcgatccgacca
gacatcgtcaactacgtccactcaaacatctccaagaatagccgccagccttatgccgtc
tccaagaaagccggtcaccagacctcagccgaatcatggggtactggtcgtgccgtttct
cgtatcccccgtgttcctggtggtggaactcaccgtgctggtcagggagcttacggaaat
atgtgccgtggtggacgcatgtttgctcccaccaagatctggcgccgctggcataggaag
attaatgtgaaccaaaagagatacgctgtcgtttcagctattgctgcatctgctataccc
tctctggtgatggcacgtggtcaccgcgtggagtcagtccccgagatgcctttgattatc
tccgactcagccgagagcattgaaaagacatctactgctattaaggtgctcaaggagatc
ggtgcttttccagatgctgagaaagctaaggattctcacgcgatccggcctggaaagggg
aaaatgaggaacaggaggtatatttctcgcaagggacccctgattgtttatggaaccgaa
ggtgctaagatggttaaggccttccgtaatattccaggagtggaggttgctaacgttgag
aggttgaacttgttgaagttggctcctggtggtcatcttggaaggtttgtgatctggacg
aaatcagctattgagaagcttgattcaatttatggttcatttgagaagtgttcagagaag
aagaaggggtatgtgctgcctaggtccaagatggtcaatgctgatttggctaggatcatc
aactctgatgaggttcagagtgttgtgaagccaatcaagagggaggttaagagggctact
ttgaagaagaacccattgaagaacttgaatgtgttgttgaaattgaacccatatgctaag
actgctaggaggatggctcttttggccgaggcagagcgtgtgaagtctaagaaggagaag
ctcgacaggaagaggaagcctgtctcaaaggaggagctagccgctgccaaggctgcagga
aaggcatggtacaagacaatgatctcagacagcgattacacagagtttgagaatttcaca
aagtggcttggtgtctctcagtaa
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