Populus trichocarpa (black cottonwood): 7465318
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Entry
7465318 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7465318
KO
K11979
E3 ubiquitin-protein ligase UBR7 [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7465318
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7465318
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
7465318
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-UBR
PHD
PHD_ash2p_like
Motif
Other DBs
NCBI-GeneID:
7465318
NCBI-ProteinID:
XP_002303646
UniProt:
A9PBM1
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Position
3:15633958..15638068
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AA seq
415 aa
AA seq
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MDGVFDDEVEQTVTIDEYLKNVEAEELNADLVLGGDEGNECTYNMGYMKRQAIFSCLSCT
PDGNAGVCTACSLSCHDGHEIVELWTKRNFRCDCGNSKFGEFVCKLFPKKDVENAENSYN
HNFKGLYCSCDRPYPDPDVEAQEEMIQCIMCEDWFHDEHLGLESSNEIPRDEEGEPLYED
FICKTCSTVCSFLTLYPKTIRAAGGKGDATYSNAKDKDVLEDVPTACGSGKLENDICANN
SSEKDNATAGKASAVGESSWRNSGSNNSNQCTKDTNLDTTCVLGVDVEVTSPVSEGKPLF
LSKNWRDILCRCEKCLDMYNQKHISYLIDREDTIVEYEKMAKQKREEKLQQQEGAELSFF
NKLGHIEKVEILNGIADFKDEFRSFLESFDKSKTITSSDVHQIFENLAKKRRRMQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgtttttgatgatgaggtcgagcaaactgttaccattgatgaatatctcaaa
aacgttgaagctgaggaactgaacgcggatttggttttgggaggagatgagggaaacgag
tgcacttataacatgggatatatgaagagacaggctattttctcatgtctgtcatgcact
ccagatggaaatgctggagtttgcactgcttgtagtttgtcttgccatgatggccatgag
attgtggagttatggaccaagagaaattttcggtgtgattgtggcaattcaaaatttggg
gagttcgtctgcaagcttttcccaaagaaagatgtggaaaatgctgaaaattcatataat
cacaacttcaaaggtttatactgctcttgtgatcggccctatcctgatccagatgttgag
gcacaagaagagatgatacagtgcattatgtgtgaagactggtttcatgacgagcatctt
ggcctagagtcttccaatgagattccaagagatgaggaaggagagcctctctatgaagat
tttatatgcaagacatgctcgacagtttgttcttttctaacactatatcccaagacaatt
cgggcagcaggggggaaaggtgatgctacttatagtaatgctaaggataaggatgtgctg
gaagatgttcccacagcttgtggttctgggaagcttgagaatgatatatgtgctaacaat
tcttctgaaaaggataatgcaacagctggaaaagcttctgctgttggagaaagttcttgg
aggaatagtgggtcaaacaactcaaaccaatgcacaaaagacaccaatcttgatactact
tgtgttcttggagttgatgtggaagtcacttcacctgtttcagaaggaaaaccattgttt
ctttccaaaaactggagggacatcctgtgtagatgtgaaaaatgcttggatatgtacaac
cagaagcatataagttatcttattgacagggaggacaccattgttgagtatgagaaaatg
gcaaagcagaagagggaagaaaagttgcagcaacaggagggcgctgagttgagctttttc
aacaagcttggtcatatagagaaggtggagattctgaatggtattgcagacttcaaggat
gaatttcgttcctttttggagtcattcgataaatcaaagacaatcacatcctctgatgtc
caccaaatttttgaaaatcttgcaaagaagcgccggcgaatgcagtga
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