Populus trichocarpa (black cottonwood): 7465327
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Entry
7465327 CDS
T01077
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 8 homolog A
KO
K03031
26S proteasome regulatory subunit N12
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
7465327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pop03051
]
7465327
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
7465327
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSN8_PSD8_EIF3K
SAC3_GANP
RNA_polI_A14
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
7465327
NCBI-ProteinID:
XP_002303668
UniProt:
A9PI71
LinkDB
All DBs
Position
3:15820571..15823821
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AA seq
267 aa
AA seq
DB search
MDPKLTEVSQLFERFKAACTREDFNTSTNLLSQLKVLLTGFRSLPPLFENTPNAVQELTI
ARDVFEHAVLLSVKIGDQEAFERDFFQLKPYYTDASSCLPQSPQEYMILGLNLLRLLVQN
RIAEFHTELELLSPTALENPCIKHAVELEQSFMEGAYNRVLSAKQNVPYKTYDYFMDLLA
KTVRDEIAGCSEKAYDYLSISDARQMLLFPSENELLEYIKEEHPEWEIKNGSVVFQKAKE
SAPCKEIPSLQLINQTLSYARELERIV
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaagctaacagaagtatcccagctattcgagcgattcaaagcggcgtgcaca
agagaagatttcaatacttcgacgaatctgctctctcagctcaaggtcttgttgacagga
tttcgaagcttgccgccgttgtttgaaaacacacctaatgctgttcaagaattaacaata
gcaagggatgtatttgagcatgctgttcttttgagtgtgaagattggggatcaggaggcc
tttgaaagggatttctttcagttgaagccttattacaccgatgccagtagctgtcttccc
caatctcctcaggagtatatgatcttgggtctcaacctcttgagactcttagtccagaat
agaattgctgaattccatactgaattggaattgctctcccctactgctttggagaatcct
tgcatcaagcatgctgtggagttggagcagtcctttatggaaggggcttacaatcgcgtg
ttatctgcaaaacagaatgtgccatacaagacttatgattattttatggatctcttggcg
aagactgtgagggatgaaattgctggatgcagtgagaaggcatatgactatctttcaata
agtgatgcccgtcaaatgttgctctttccttccgaaaatgaacttttggagtacatcaag
gaggagcatcccgagtgggagataaagaatggctctgtagttttccagaaggcaaaagaa
tctgccccctgcaaggaaataccatctctacaactcatcaaccagacattgagttatgct
agagagttggagcggattgtgtaa
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