Populus trichocarpa (black cottonwood): 7465359
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Entry
7465359 CDS
T01077
Name
(RefSeq) DNA polymerase eta isoform X2
KO
K03509
DNA polymerase eta [EC:
2.7.7.7
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
7465359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pop03400
]
7465359
Enzymes [BR:
pop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
7465359
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
7465359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
POLH-Rev1_HhH
IMS_C
IMS_HHH_1
IMS_HHH
UBM
DUF1805
EspB_PE
Motif
Other DBs
NCBI-GeneID:
7465359
NCBI-ProteinID:
XP_024453355
LinkDB
All DBs
Position
3:complement(16542750..16556118)
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AA seq
703 aa
AA seq
DB search
MPVARPESSDSRTRIIAHVDLDCFYVQVEQRKQPELRGLPTAVVQYNEWKGGALIAVSYE
ARKLGVNRHMRGDDAKEVCPQIHLVQVPVARGKADLNTYRNAGSEVVSILARKGRCERAS
IDEVYLDLTDSAEAMLRETPPESLESINEESRKSHILGLKSEDANDAQENVSKWLRRSDA
NHQDKLLACGALIVSELRMEVLKETQFTCSAGIAHNKMLAKLVSGMNKPAQQTVVPSSSV
KGLLESLPIKKMKQLGGKLGTSLQTDLGVSTVGDLLQFSEEKLQERFGINTGTWLWSIAR
GINGEEVQGRLLPKSHGAGKSFPGPRALKTIASVQHWLNQLCDELNERICCDLDQNKRIA
HTFTVYASAYKSCDSESYKKFPSKSCPLRYGTAKIQEDAFNLFQAGLREYIGSHGVKTLG
HHHNGWGITSLSVSASKIVAIPSVRSQNTFMDSIHHPLQRKQRIALSKKPCHYHRQAVKA
IRSWNQLISCNLRIMYRVWVYKNRKEFHGKIRIHLVLQQCRQRMVVAREPHHHHPQVLYS
RSGCCSLVNQTGSQGASRVDSTMPTLERHKRKIKPSDKGTILKFLKSYNLSGSTPMQENV
EMVKGSQSPSCSSLEVNQAELPRRSLAECSTNDGSNNLDQNAQRAWNYKIDEIDHSIVNE
LPSEIQDEIRVWLQARQQPSMVKRPSIIKRGSIAHYFSPDRNT
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggctagaccagagtcatccgattcaaggacaaggatcatcgctcacgttgac
ttggattgcttctacgttcaagtggagcagcgtaagcagcccgagttgaggggcttacct
acagctgtggtgcagtacaatgagtggaaaggtggggctttgattgcagttagttacgag
gctcgtaaacttggagtcaatcgtcacatgagaggtgacgatgcaaaagaagtttgccca
caaattcacctggttcaagtgcctgtagctagaggtaaagctgacctgaacacttaccgc
aatgcaggttctgaggtggtgtctattctggcaagaaagggtcgatgtgagagggcttca
attgatgaagtttatcttgaccttactgattcagcggaggctatgctgagagaaactcct
ccagagagcttggaatcaataaatgaggaatctcgcaaatcacacattttggggcttaaa
agtgaggatgcaaatgatgcccaagaaaatgtgagcaagtggttacgtaggagtgatgcc
aatcaccaagacaagttactagcttgtggggccctcatcgtgtcagaacttaggatggaa
gtcttaaaggaaacccaatttacatgttctgctggcattgctcataacaagatgctagcc
aaacttgtaagtggcatgaataaacctgcgcaacaaactgttgttccctcctcatctgta
aaaggtttgctcgaatcattgccaataaagaaaatgaaacagcttggagggaagctgggg
acttcattgcagactgacctgggtgtgagcactgttggagacctcctgcagttttcagag
gaaaagctacaggaacgttttggcataaatacaggtacatggttgtggagcattgcgaga
ggaatcaatggggaagaagttcagggccgccttctccctaagagccatggtgctgggaag
tcatttcctggtcctcgtgctttgaagacaattgcttccgttcaacactggctgaatcaa
ctttgtgatgagcttaatgaacgtatttgctgtgatttggaccaaaacaagcgaattgca
cacacttttactgtttatgctagcgcatacaagtcttgcgactcggaatcatataaaaaa
ttcccttcaaaatcttgtccattgagatatgggactgccaagattcaagaggatgcattt
aatctatttcaagctggattacgtgaatatataggttcacacggagtcaaaacactaggt
catcatcacaacggatggggaataacttctctttctgtttcagcaagtaaaattgttgct
ataccatctgttcgatcacaaaatactttcatggacagtatacatcaccctcttcaaagg
aaacaaaggatagctttgtcaaagaagccatgccattatcaccgtcaggcagtgaaagct
attcggagctggaaccaactgatcagctgcaacctgagaataatgtaccgtgtttgggtc
tacaagaacagaaaagaattccatggaaagatcaggattcatcttgttcttcaacagtgc
agacaaaggatggtagtggcaagggagcctcaccatcatcaccctcaggtgttgtattca
agaagtggatgttgctcacttgtaaaccaaaccggctctcagggagcctccagggttgat
tctaccatgcctactttggaacgacataaaaggaaaataaaaccttctgataagggaaca
attttgaaattcttgaagagctacaatctctcgggctccacaccgatgcaggagaatgtt
gaaatggttaaaggctctcaatctccaagttgcagcagcttggaagtgaatcaagctgag
ctgccaagacggagtcttgcagaatgtagtacgaatgatggcagcaataatttggatcaa
aatgcacaaagggcatggaattacaagatcgacgagattgatcactctattgttaatgag
ttgccatcagaaatccaagatgaaattcgggtctggctccaggctcgtcagcaacctagt
atggttaaacgtcctagtataattaaacgaggttctattgcccattatttctccccagac
agaaatacatag
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