Populus trichocarpa (black cottonwood): 7465387
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Entry
7465387 CDS
T01077
Name
(RefSeq) EIN3-binding F-box protein 1
KO
K14515
EIN3-binding F-box protein
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04016
MAPK signaling pathway - plant
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
7465387
04075 Plant hormone signal transduction
7465387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7465387
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
7465387
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box
F-box-like
LRR_RPS2
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
7465387
NCBI-ProteinID:
XP_002324298
UniProt:
B9IKX3
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All DBs
Position
18:complement(2059206..2063262)
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AA seq
646 aa
AA seq
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MSKVFEFAGENDFCPGGPIYTNPKEPSLFLSLGLPVDVYFPSRKRSRISAPFVFSEERFE
QKKQASIEVLPDECLFEIFRRLPGGEERSACACVSKRWLILLSSICRDELCSQNRSAVKN
TEVKSKIEDEEIEGDGCLSRSLEGKKATDIRLAAIAVGTANCGGLGKLFIRGSNSSQGVT
KVGLRAIARGCPSLKVLSLWNLPSVGDEGLSEISNGCHMLEKLDLSQCPAITDKGLLAIA
KNCINLTDLVLESCSNIGNEGLQAVGKHCTNLKSISITNCPGVGDQGIAALVSSASNVLT
KLKLQSLNITDVSLAVVGHYGKAVTDLVLTSLPNVSERGFWVMGNGQGLHKLKSLTVTSC
LGVTDIGLEAVGKGCPNLKQFCLHKCAFLSDNGLVSFAKAAETLESLQLEECHRITQFGF
FGSLLNCGANLKAISLVNCFGIRDLKLDLPELSPCNSLRSLSIRNCPGFGDGSLALLGNL
CPQLRNVELSGLQGVTDAGFLSVLENCEAGLVKVNLSGCINLSDKVVSVMTEQHGWTLEM
LNLDGCRRITDASLVAIAENCFLLYDLDVSKCATTDSGIAAMARSKQLCLQVLSVSGCSM
ISDKSLPALVKLGQTLLGLNLQHCNAISSSTVDILVERLWRCDILL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggtctttgaatttgctggtgaaaatgatttttgtcctggggggccaatatac
actaaccccaaggagccgagcctcttcttgtcccttggtcttcctgtggacgtgtacttt
ccttcacgcaagaggtctcgcatcagtgctccatttgtcttttctgaggagagatttgag
cagaaaaagcaagcttctattgaagttttgccagatgaatgcctcttcgaaatcttcaga
cgtttgcccgggggtgaagagagaagtgcctgtgcctgtgtttcaaagcgttggcttatt
cttctaagcagcatatgcagggatgaactttgcagccagaatagatcagctgtaaagaac
actgaggtgaaaagcaagattgaggatgaggaaattgaaggtgatggatgcttgtccagg
agcttggaggggaaaaaggccacagatattagacttgctgctattgctgttggaactgct
aattgtggaggattgggcaagctttttatccgtggaagcaattctagtcaaggagtgaca
aaggttggcctcagagcaattgcccgtggatgcccttctctgaaggttctttccctgtgg
aatttgccttctgtcggggatgaaggtttatcagagatttccaatggctgtcacatgctg
gagaagctagatctttcccaatgccccgcaattactgacaagggtttgcttgcaattgca
aaaaactgcatcaatctgaccgatctagtgttagaatcttgctcaaacattggcaatgaa
ggtctgcaggctgttggcaagcattgcaccaatctaaagtccatttcaatcacaaactgc
ccaggtgttggggatcagggaattgcagccctcgtatcttctgcctcaaatgttttgaca
aagctgaagctccaatcactgaacattactgacgtgtccctggctgttgttggacactat
ggcaaggcagttaccgatcttgttctgacaagcctcccaaatgtcagtgagaggggcttc
tgggtcatgggtaatggccaagggttgcataagttgaagtccttgacagttacatcctgt
ctgggagtgacagatattggacttgaagctgtgggaaagggttgcccaaatttgaaacag
ttctgcctccacaaatgtgctttcttatctgacaatggactagtctcatttgcaaaagca
gcagagacactggagagcctgcaattagaggagtgccacaggatcacccagtttgggttt
tttggttcccttttgaactgtggtgcaaatctgaaggctatttctttggtgaactgcttc
gggattagggacttaaagctggatttgcctgagctgtctccttgcaattccctacgatca
ttgtctatccgcaactgccctggttttggtgatggtagcctggcgttgttgggtaacttg
tgcccacaactgcggaatgtggaattgagcgggcttcagggagttactgatgctgggttt
ctctcagtacttgagaactgtgaggctggtctggtgaaggttaaccttagtgggtgtatc
aatttgtctgacaaagtggtgtcggtgatgactgagcagcatggttggactcttgagatg
ttgaatcttgatggatgtaggaggataactgatgcaagtttggtggcaatagcagagaat
tgcttcttgctatatgaccttgatgtctctaagtgtgcaaccaccgattctgggattgca
gccatggcacgctcaaaacagctctgtctgcaagtcctttctgtgtcaggttgctctatg
atatcagacaagagcttacctgcccttgtaaaattgggtcagaccctcttgggtttgaat
ctccagcactgcaatgctatcagcagcagcactgttgatatacttgtggagaggttatgg
aggtgtgatattcttttgtaa
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