Populus trichocarpa (black cottonwood): 7465449
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Entry
7465449 CDS
T01077
Name
(RefSeq) transcription initiation factor TFIID subunit 10
KO
K03134
transcription initiation factor TFIID subunit 10
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
7465449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7465449
03036 Chromosome and associated proteins [BR:
pop03036
]
7465449
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
7465449
Coactivators
SAGA/TFTC/STAGA complex
7465449
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
7465449
STAGA complex
7465449
TFTC complex
7465449
SAGA complex
7465449
SLIK complex
7465449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF10
SLX9
GLV1-2
Motif
Other DBs
NCBI-GeneID:
7465449
NCBI-ProteinID:
XP_002324360
UniProt:
B9ILB5
LinkDB
All DBs
Position
18:complement(880960..883292)
Genome browser
AA seq
144 aa
AA seq
DB search
MNNTSSSNSQQQQQSSEARHDDDAVLTEFLASLMDYTPTIPDELVEHYLAKSGFQCPDVR
LVRLVAVATQKFVADVATDALQQCKARPAPVVKDKRDKQQKEKRLILTMEDLSKALSEYG
VNVKHQEYFADSPSTGMDPASREE
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacacgagcagcagtaacagtcagcaacagcagcaatcaagtgaagcaaggcat
gatgatgatgccgttctcactgaattcctcgcttctttaatggattacactcccactatt
cctgatgaattagtggagcattacttggctaaaagtgggtttcaatgtcctgatgtcaga
ttggttagattagtagctgttgcgacacagaagtttgttgcagatgttgcaactgatgct
cttcagcaatgcaaggcacggccggcaccagtagttaaagacaaaagggacaagcagcaa
aaggaaaagcgcctaattttgacaatggaggatctgtcgaaggctctgagtgagtatggt
gtaaacgtgaagcaccaggagtattttgctgatagcccatcgactgggatggatcctgct
tcaagagaagagtga
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