Populus trichocarpa (black cottonwood): 7465611
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Entry
7465611 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7465611
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7465611
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
7465611
TFIIIC, fungi type
7465611
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
Motif
Other DBs
NCBI-GeneID:
7465611
NCBI-ProteinID:
XP_052310512
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All DBs
Position
7:complement(15385680..15392391)
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AA seq
517 aa
AA seq
DB search
MGEIKEGKVSGLIPRNEGFAVHYPGYPSSTSRAIQTLGGTESILKARSSQSNTLELYFRP
EDPYSHPVSGELRSCHSMLLKITKKKKSSPINDAKQETDEFHADIVARIPEAYYFEGMAD
YEHVVPVHADVGRKRWKNCKKPGLMDLGPDDVMMLPPPLFSLKDVPENIVLRPPSTSSSR
KKQDELPETHPKMTFEPALGIDFKDVEEIPKEINWKEFITEGTPMWEWQMVVSKLFEEQP
IWPKYSLIERLLDKNLKFTYQTLKRLLLTVGYYFSGGPFQKFWIRKGYDPRKDPDSRRYQ
SIGFRVPPELKSYCDANTAKGTMALRMMDDTTPLPREYYKLVQKSSIDIKSLSTTRPTSF
LYQGLWIGNDRCCYLKLMICQLTCLKHRWEDLCKFRFFPYRNQYSFQVYELDDDYIQQEI
QKPSKQTSCIVRFLSLYPETGAEKFLKAASEKFMKSKRLCIYKDAPKPVQEEHQQTNEDH
ETFKNNEASENQVDVEVDELESDDGEEELDTWNGFGW
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgggagagataaaagaagggaaagtgagtggattgataccaaggaatgagggttttgca
gttcattatccaggttatccttcttcaacatctcgagctatccaaactcttggaggaact
gaatcaattctcaaggctcgtagttcacaatctaatacgttggaactgtattttcgccct
gaggatccatactcacatcctgtgtcaggagagcttcgttcttgtcacagtatgttattg
aaaattactaaaaagaagaagtcaagtcccattaatgatgcaaagcaagaaacagatgag
tttcatgctgatattgttgctagaataccagaggcatattactttgagggaatggcagat
tacgagcatgttgttccagttcatgctgatgttggcaggaagagatggaagaattgtaaa
aaacctggtctaatggatttgggtccggatgatgtgatgatgctaccgcctccacttttt
tcactcaaagacgtgccagaaaatattgtgttaagaccaccatcaacatcaagttcaaga
aagaaacaagatgaacttccagaaactcatcccaagatgacctttgagccagcgcttggt
attgattttaaggatgttgaagagattcctaaggaaataaattggaaggaattcataaca
gaaggcacaccaatgtgggagtggcagatggttgtatctaagctgtttgaggagcagcct
atatggcccaaatattcactgattgaacgcttgcttgataagaatcttaaatttacctac
cagacacttaaaaggcttctgctcacagtcgggtactacttttcaggtggaccatttcag
aagttctggatcagaaagggatatgatcctcgcaaagatcccgattctcgcagatatcaa
agcattggttttcgagtaccgcctgaattaaaaagttactgtgatgctaacactgccaaa
gggaccatggcattgaggatgatggatgataccacacctcttcctagagaatattataag
cttgtgcaaaagagttctattgacatcaaatcactgtcaacaactaggccaacctcattc
ctataccaaggtctttggattggcaatgatagatgctgctacttgaagcttatgatatgc
caattgacatgcttgaagcatagatgggaggatttatgcaaatttcgattttttccttac
agaaaccaatattctttccaggtgtatgaacttgatgatgattacattcaacaagagata
caaaagccttcgaagcagacaagttgcattgtgaggttcctatcactatacccagaaact
ggtgcggaaaaatttctcaaagctgcttctgagaaatttatgaagtcaaagagattatgc
atttacaaagatgcaccaaaacctgttcaggaggagcatcagcaaactaatgaagatcat
gaaacctttaaaaacaatgaagctagtgaaaatcaagttgatgttgaggtggacgaactc
gaatctgatgatggtgaagaggaattggatacatggaatggatttggctggtga
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