Populus trichocarpa (black cottonwood): 7465635
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Entry
7465635 CDS
T01077
Name
(RefSeq) heat stress transcription factor A-1e
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7465635
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
7465635
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
TMF_TATA_bd
CENP-F_leu_zip
DUF7801
Herpes_UL25
Laa1_Sip1_HTR5
Seadorna_VP6
Motif
Other DBs
NCBI-GeneID:
7465635
NCBI-ProteinID:
XP_002319787
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Position
13:complement(6852459..6858290)
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AA seq
499 aa
AA seq
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MIRMDSGNNNTNTVPPFLSKTYDMVDDPSTDSVVSWSSSNNSFVVWNVPEFQTDLLPKYF
KHSNFSSFVRQLNTYGFRKVDPDRFEFANEGFLRGQKHLLRSISRKKPVHGNLPPQVQSS
SVTTCVEVGKSGLEEEVERLKRDKNVLMQELVRLRQQQQATDHQLHTVGQRVQGMEQRQQ
QMMSFLAKAMQNPGFLSQLVQQQNESNRRIAGASKKRRLPRQEEENLAGVQCKTSPNGQI
IKFHSSMNEAAKAMLHQILKMNSSPRLEPSMNNSGPLLIGNHPSSNGLDSGSSSTRMSGV
MLSEVPTASGPSYLPMETGFPASHSTTAISEVQSPASVATDYVKTDYTAEMGMHNSGQNT
ILPNFTAMTGIVPGGSAGGPNMNIAGSEKGNAEFFDTMSSVLDAPVPIETEALSPSQDEE
VFLDGNHKLPGINDVFWEQFLTASPLNGETDEINSSSPESSMSKEQELQSWQDNGWDNIQ
HMNRLAEQMGLLTPESLKG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgattagaatggatagtgggaataataacacgaacacggtgcctccatttctaagcaag
acctacgacatggtagacgacccgtcgacggattcagtggtgtcatggagtagcagcaat
aacagttttgtggtctggaatgtcccagagtttcaaacagatcttttgcctaaatacttc
aagcacagtaacttctccagctttgtcaggcaattgaatacttacggtttcaggaaggtt
gatcctgatcgctttgaatttgcaaatgaggggttcttaaggggccaaaaacaccttctg
aggagtatatctaggaaaaaacctgttcatggtaacctaccacctcaagttcagagctct
tcggttaccacatgcgttgaggttgggaagtctgggctcgaggaagaggttgaaagactt
aaacgagacaaaaatgttctcatgcaggaacttgttagactgaggcagcagcagcaagcc
acagatcaccagttgcacactgtgggccaacgtgtacagggaatggagcagcgacagcaa
caaatgatgtcattccttgcgaaggccatgcagaatccaggcttcttaagtcagcttgta
cagcagcaaaatgaaagcaacagacgcattgctggtgccagtaaaaagaggagacttcca
aggcaggaggaagagaatttggctggtgtgcaatgcaaaacatctcctaatgggcagatt
atcaagttccattcttcaatgaatgaagcagcaaaagcaatgttgcaccagatcctgaag
atgaactcatcacctaggctggaaccatcgatgaacaattctggtcccttactgatcggt
aatcatccttcttccaatggattagacagtgggagctcttcaactcggatgtcaggagtg
atgctttcagaggttccaacagcttctgggccatcatatttgcctatggaaactgggttc
ccagccagccattcaactactgccatttctgaggtccaatctcctgcttctgtagcaacc
gactatgttaaaacagattatactgctgagatgggcatgcataattctgggcaaaatacc
atcctgcccaacttcactgcaatgacaggaattgtgcccggaggctctgctggaggtcct
aacatgaatattgcagggtctgagaaggggaatgcagagttttttgacaccatgtcatct
gtgttggatgcgccagtgcccatagaaactgaagctctctctcccagccaggatgaggaa
gtctttctggatggaaaccataagcttcctggcattaatgatgtgttctgggaacaattt
cttacagcaagcccgctcaatggggagacagatgaaattaattcaagctctccagaaagt
agcatgagcaaggagcaggaattgcaatcatggcaggacaatggatgggacaatattcaa
catatgaatcgtctagctgaacaaatggggcttcttacaccggaaagcttaaaagggtga
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