Populus trichocarpa (black cottonwood): 7465843
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Entry
7465843 CDS
T01077
Name
(RefSeq) RHOMBOID-like protein 2
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7465843
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
7465843
Peptidases and inhibitors [BR:
pop01002
]
Serine peptidases
Family S54: Rhomboid family
7465843
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DER1
Motif
Other DBs
NCBI-GeneID:
7465843
NCBI-ProteinID:
XP_002304474
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Position
3:complement(14363155..14366157)
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AA seq
321 aa
AA seq
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MASGDLERGTKNRGNNANFPSYYVETAEKQWTSWIIPMFVVANIAVFIVVMYVNDCPKKS
LGIEGSCVAKFLGRFSFQPLKENPLFGPSAATLEKMGALEWNKVVHGHQGWRLITCMWLH
AGVVHVLANMLSLIFIGIRLEQQFGFVRVGIIYLVSGFGGSILSSLFIQQNISVGASGAL
FGLLGAMLSELLTNWTIYSNKIAALLTLVVIIAINLAVGILPHVDNFAHIGGFMSGFLLG
FVFLLRPQFGWAENRHSPADARVKSKHKAYQYVLMLAAAVLLIVGFTLALVMLFKGENGN
DHCSWCHYLSCVPTSKWNCRS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtggagatctagagagggggacaaagaacagaggaaataacgcaaatttccct
tcatactatgttgaaacagcagaaaagcaatggacttcatggataattcccatgtttgtt
gttgcaaatattgctgtttttattgttgtcatgtatgtcaacgattgtcctaaaaaatct
ctgggtattgaaggtagttgcgtggctaagtttcttggcaggttctcttttcagccgttg
aaggaaaaccccctgtttggcccatctgctgctacattggaaaaaatgggagctctggag
tggaacaaagtagtgcatggacatcaagggtggaggctcatcacttgtatgtggttgcat
gccggagttgttcatgtgcttgcaaatatgttaagcttgatctttattgggattcgtctt
gaacagcaatttgggtttgtgcgagttgggattatctacctagtatcaggatttggtggg
agcatcttgtcttcactttttattcagcaaaacatttctgtcggtgcatctggtgctttg
tttggacttcttggagcaatgttgtcagagcttcttaccaactggacaatctattctaat
aagattgctgctctactcacacttgtggtcatcattgccattaacttagctgtgggaatt
cttccacatgttgacaacttcgcccacattggaggtttcatgagtggttttctcctcggc
tttgttttcctacttcgtcctcagtttgggtgggcagaaaaccgacattctcctgccgat
gctcgtgtaaaatccaagcacaaggcttaccaatatgtactcatgctagctgctgcggtg
ttgcttattgttggatttactttggcattggtaatgctatttaaaggagaaaacgggaat
gatcactgcagctggtgccattaccttagctgcgtgcctacttcaaaatggaactgccgg
agctga
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