Populus trichocarpa (black cottonwood): 7465940
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Entry
7465940 CDS
T01077
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 2 isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03015
mRNA surveillance pathway
pop04156
Integrated stress response (ISR) signaling pathway
pop04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
7465940
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
7465940
09140 Cellular Processes
09143 Cell growth and death
04156 Integrated stress response (ISR) signaling pathway
7465940
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
7465940
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7465940
03019 Messenger RNA biogenesis [BR:
pop03019
]
7465940
03041 Spliceosome [BR:
pop03041
]
7465940
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
7465940
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
7465940
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
7465940
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
7465940
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
7465940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
7465940
NCBI-ProteinID:
XP_002325330
UniProt:
B9IP96
LinkDB
All DBs
Position
19:2973461..2979165
Genome browser
AA seq
336 aa
AA seq
DB search
MEQAVLDDIIERLLEVRGKPGKQVQLSESEIRQLCVVSREIFLRQPNLLELEAPIKICGD
IHGQYSDLLRLFEYGGFPPDASYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN
HECASINRIYGFYDECKRRFNVRIWKAFIDCFNCLPVAALIDEKILCMHGGLSPELNNLE
QIRNLQRPTDVPDSGLLCDLLWSDPSKDVQGWGMNDRGVSYTFGPDKVAEFLQKQDLDLI
CRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDDTLMCSFQILKPADKKSK
FQPGNTSTGVGVFGSTITAKPGNPLPGVKSFLGTNV
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagcagttcttgatgatataatcgagaggttattagaggttagagggaaacct
ggaaagcaagttcagttatcagagtccgagatccggcaactttgtgtggtgtctagagag
attttcttgcgccagcctaatttgttggagcttgaagcacccatcaagatttgtggtgat
atccatggtcaatattctgatcttctaaggctattcgaatatggtggtttccctccagat
gcaagctacttatttttgggggactatgtggatcgaggcaagcaaagcctggagacaata
tgtcttctccttgcttataagataaaatatccagaaaactttttcctcttgaggggaaac
catgaatgtgcttcaataaaccgcatatatggtttttatgatgagtgtaagagaaggttt
aatgttaggatatggaaggcatttattgattgttttaattgcctacctgtggctgcgcta
attgatgagaagattctctgcatgcatggtggattgtctccggagctaaataatttggaa
cagattcgaaacttacagcgcccaactgatgtaccagactcaggtttactctgtgatctt
ctctggtcagatcctagtaaagatgttcagggttgggggatgaatgacaggggagtttca
tacacatttggtcctgacaaggtggcagagtttcttcagaagcaggatttggatctcatt
tgtcgtgcccaccaggttgtggaggatggatatgagttctttgccaaccgacaacttgta
actatattttcagcgcctaattactgcggggagtttgataatgctggtgctatgatgagt
gtggatgacactttaatgtgctctttccaaatattaaagcctgctgataagaaatcaaag
tttcagcctggaaacacttcaaccggagtaggtgtttttgggagcaccattacagctaag
cctggaaaccctctgccaggagtcaagtccttccttggcacaaacgtatga
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