Populus trichocarpa (black cottonwood): 7465944
Help
Entry
7465944 CDS
T01077
Name
(RefSeq) peroxisome biogenesis protein 12 isoform X2
KO
K13345
peroxin-12
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
7465944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7465944
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
7465944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-rbx1
NinF
zf-P11
PRIMA1
Motif
Other DBs
NCBI-GeneID:
7465944
NCBI-ProteinID:
XP_002325774
LinkDB
All DBs
Position
19:complement(3189874..3194896)
Genome browser
AA seq
388 aa
AA seq
DB search
MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFLHKVLDHEDEFFSLLM
LVLETHSLRTTDASFSESLYGLRRRTVKIRVKKEDVRPNSGDGIQHSGLEKHQRILSVVF
LVVLPYFKSKLYSIYNKEREARLQASLWGNGDETVEDAEYFSGGEASLVSRETTIRARLM
KKIQKILFVCYPWLHASNEGMSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQELMDTT
SRISKIRSNERERLHGPPWLKALQGALLSCGYTMLDYAQTGLIAAVFIFKMMEWWYQSAE
ERMSAPTVYPPPPPPPAPKVAKEGIPLPPDRTICPLCSQKRANPSVVTISGFVFCYACIF
KYLSQYNRCPVTLMPANVDQIRRLFHDM
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaagtaggaggacaagggacacgacccaccttcttcgagatggctgctgct
caacaactccctgccagtctccgtgctgcccttacctactccatcggtgtattggcatta
agaagaccattcctgcataaggtgttggaccatgaagatgaattcttttcattgcttatg
ttggtccttgagactcatagcttgcggactacagatgcttctttttctgaatccctatat
ggattgcgaagaaggacggtgaagataagagtaaagaaggaagatgtgcgtccaaactca
ggggatggaattcagcactcagggttagaaaagcaccaaagaattctttcagttgtattt
ttggttgtgttgccttattttaagtcaaaattgtattcaatatataacaaagaaagggaa
gccaggcttcaagcaagtttgtggggaaatggtgatgaaacagttgaagatgctgaatat
tttagtggaggggaggcttctcttgtttctagagaaacaacaattagagcacgtttgatg
aagaaaattcagaaaattttgtttgtttgctacccttggctgcatgctagtaatgaagga
atgtcatttgcttatcagctcttatatttgctggatgctactgggttctattcgttagga
ctacatgcacttgggattcatgtttgtcgagctacagggcaagagctgatggacactact
tctagaatttcaaagatacgaagcaatgaacgcgagagacttcatggccccccatggttg
aaggcgttacaaggagcattgctaagctgcggatatacaatgcttgactatgcacaaact
ggcttgattgcagcagtgttcatctttaaaatgatggagtggtggtaccaatctgctgag
gagagaatgtcagctccaacagtgtatcccccacccccaccacctccagccccgaaggtt
gccaaagaggggattccactgccacccgatagaacaatctgcccgttgtgctcccaaaag
cgtgcaaacccttcggttgttacaatctcaggatttgttttctgttatgcttgcatattc
aaatatctatctcagtataaccgctgcccagtcacattgatgccagcaaacgttgatcag
ataaggaggttgttccatgatatgtag
DBGET
integrated database retrieval system
